Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre6g00901 ATGTCTCCAACTGAAAAATACGACGTGTTTATCAGTTTCAGAGGAGAGGATACTCGTGACAACTTCCTAACTAAACTTTCAGGCTGGGATTCAAAAGAAATCAGTCCAGAACATAAACTTGTTACCGACATTGTGGAAGAAATTTTGAGGAAAAAAATGAATCGTTATTGTTTAAAAACCGGACAAGAAATTGTTCGTCAGCAGTCTAACGATGATCCTAGAAATCAGACTCGATTGTGGAATCCTGAAGAAATTTATCATGTTTTAATAAACAAGGGGTCAAATGCAATCCGGTGTATATTCCTGGACATCTGCAAAATATATAAGGTTCAACTACAGGCTGACACTTTCGAAAAGATGAATAATCTTAAAATACTTGAGTTTTATAAGTCTTTTCCACAAGGCGACTCGAATGTGATCCTGCGAGAATCTATTAAAAACCTTTCTCATACATTAACATTTCTTCGTTGGGATGGCTTTCCTCAAAAACATCTGCCACTGGAGTTTTGTCCAAAAAACCTCGTCAAACTTGATATGCGTGAAAGCGATCTTGAGAAACTTTGGGAAGGAGATGATCAGCATTTACCAAATTTGAAAAGACTTGATCTTAGTCGTTCTAAGAAGCTTACTAAAGTGCCAGACCTAGCACTTTCTCCAAATATTGAAAAAATCATTCTAAGTGGTTGTGAAAGCTTGACTGAAGTTTCGTCCTCGAGTTTCCTCAGCAAGCTCAACTGTTTGTGTTTAAATGGTTGTGTTCAGCTCAAGAGTTTGCATCTTCCAAGGAATGTTCTGTCGCGAAGTCCTGGATTAGTTGTTCTTTATGATTGTGCCAAGCTTGAACTATCTTCAATCAGCTCTAAAACTCATGTTTTTTTCCACGGGGGCTGTACTCATCTTGTTCGTGTTGAAAATTTATATTTTCTATTCTAA 933 0.3708 MSPTEKYDVFISFRGEDTRDNFLTKLSGWDSKEISPEHKLVTDIVEEILRKKMNRYCLKTGQEIVRQQSNDDPRNQTRLWNPEEIYHVLINKGSNAIRCIFLDICKIYKVQLQADTFEKMNNLKILEFYKSFPQGDSNVILRESIKNLSHTLTFLRWDGFPQKHLPLEFCPKNLVKLDMRESDLEKLWEGDDQHLPNLKRLDLSRSKKLTKVPDLALSPNIEKIILSGCESLTEVSSSSFLSKLNCLCLNGCVQLKSLHLPRNVLSRSPGLVVLYDCAKLELSSISSKTHVFFHGGCTHLVRVENLYFLF 310
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre6g00901 310 Gene3D Ribonuclease Inhibitor 81 308 IPR032675 -
Trre6g00901 310 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 47 264 IPR044974 GO:0006952
Trre6g00901 310 SUPERFAMILY L domain-like 88 300 - -
Trre6g00901 310 Gene3D - 2 27 IPR035897 -
Trre6g00901 310 Pfam Leucine Rich Repeat 173 190 IPR011713 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre6g00901 Trre-Chr6 6918385 6920984 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre6g00901 53 296 WRKY Transcription Factor Family AT4G12020 37.402 3.34e-34 130
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre6g00901 - - tpra:123916708 434.876