Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre6g00896 ATGAAATACTCAACTCCAACACAAACACCAACTTCTTCAAATGTATCTCCATCAATTTCATCCAACACACCAATGTGTAGCTCCAAAACCACCGCAACAGGATGTCTCACAGCCATCATGCGCAAGATTCTTTGCTCAGGAAACCTTCCAAAAGATCAATCAAATCAAATGACAGAATTTGATTCAACAAACTCTGTTATGAGTTGCAAAGATCATAACTTCAATTTTTCTGAGGACAATGCTATGGCTACTGCTGCTGCTGCTGTTACACCTCCTCCTCCTATAGTTGCAAGGTTGATGGGTTTAGAATCAATGGGAGAAGTACCATTTGCATCAAAACCAGGTTCGCTTTCGCGTAGCAAATCGATGAACTCTATGGATTATTTAGGAGAAAGCAATGGAAAAATTCAGAGTCTTTATCATAAGAGAGTTAATTCAACATTGTCATTTAGAGAGCCTCCAACTTTTCAGTTAACTGAAAATGAGAGCTTTTTTGTGCTTAACTTTGAAAATGAAGTTGAGAGTGTTAAAGGGTTGAAATTGAAATCCAAATTCAATGGGAGAAATAAGCAAATGGGCTGTTCTGAATTGAAGCAGAAAGATGAAAAAAAGATAGTTGATTTGAAGGAGAAGAAGAACAAGAGAGAAAATGTTTATGATGAGAAAGGAAAAATGAGCAAAAGGGTGTCTAATAAACTTCAAGAAATCACCAACACTTCATATAAGTTCAAGAGTTTATCTGAAAAGAAGTGTTTTGATTCAGAAGCAGTTGAATTTTTGAAGCCAAAGAGCTACAAGGAAGTTGAGATTGGTGAAAAGAAGAAGAGGAGAATAAGGAGGAAGAAAAGAACAAATTTTTATGCAGAAAAGAAGATTGAAACTGAATGCAAATCAGATGAATCAAGTCCTGTTTCTGTCCTCGAATTCGAGCGCAAGTCTTGTGGAACAGGAATAGATTCTATTGCAGTTGGTTTAAGTTCAAGAAGAAAGTTGACACCAGAGCTTGAAAATAACAAGAACATTCTTATACGTTCTGATGATAATTTGATGATTGATGAGAAGAAGGATAAGGAAATTGAAGGATCAAAGAAGAAAGAGAAGCATAATTACAAAGAGTATATAGATATTTGGGGTGAAGCATGCAGGCTAGTTGAAGCTGAATTGGTTGGTTCAAAAAATCAAGTTCATGCATGGATTAATCAAGAAAGTGATTTAGGAAGTGTATGTGCTGATTTTGAGTCAGAAATTTTTGATCAATTGTTGAATGAGATGATAAGTCAACTTGTTGAGTAA 1293 0.3542 MKYSTPTQTPTSSNVSPSISSNTPMCSSKTTATGCLTAIMRKILCSGNLPKDQSNQMTEFDSTNSVMSCKDHNFNFSEDNAMATAAAAVTPPPPIVARLMGLESMGEVPFASKPGSLSRSKSMNSMDYLGESNGKIQSLYHKRVNSTLSFREPPTFQLTENESFFVLNFENEVESVKGLKLKSKFNGRNKQMGCSELKQKDEKKIVDLKEKKNKRENVYDEKGKMSKRVSNKLQEITNTSYKFKSLSEKKCFDSEAVEFLKPKSYKEVEIGEKKKRRIRRKKRTNFYAEKKIETECKSDESSPVSVLEFERKSCGTGIDSIAVGLSSRRKLTPELENNKNILIRSDDNLMIDEKKDKEIEGSKKKEKHNYKEYIDIWGEACRLVEAELVGSKNQVHAWINQESDLGSVCADFESEIFDQLLNEMISQLVE 430
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre6g00896 430 PANTHER OS05G0128300 PROTEIN 27 430 - -
Trre6g00896 430 MobiDBLite consensus disorder prediction 1 23 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre6g00896 Trre-Chr6 6875152 6876858 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre6g00896 291 428 TRM (TON1 Recruiting Motif) Superfamily AT5G58630 37.241 3.42e-10 59.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre6g00896 - - mtr:25490904 538.495