Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre6g00883 ATGTTAGCAAATTATGTTTGTGCAAAAGCATCTGAATTTGCAGCACATAATTTGGAAAATAATTTGTTAGAAGTGATTAAAAGTGATCATGAGAGTGATATTGAGGAAGCTGTGAAAAATGGCTACCTTAAAACAGATTCAGATTTCTTAAAAGAGGAACTTAATGGTGGCTCTTGCTGTGTAACAACATTGATTAAGAATGGTAATCTTATTGTGTCTAATGCCGGCGATTGTCGTGCTGTCATCAGTAGTGGTGGTGTTGCTGAGGCATTAACATCTGATCATAAACCTTCAAGGATAGATGAAAAGGAAAGGATTGAAACTCAGGGTGGTTATGTTGATATGTGCCGCGGTGTTTGGAGAATTCAAGGATCTCTTGCTGTTTCAAGGAGCATTGGAGATAGACACATGAAACAATATGTGATAGCAGAACCTGAGACCAAAGTTGTTAGAATTGAATCTCATCATGACTTGTTAATCTTAGCTTCTGATGGATTATGGGAGAAGGTTAGTAATCAGGAAGCCGTAGATATTGCTCGTTCTTTTTGTGTAGGGAGCAATAGACAAGGACCATCTAAGGCTTGTAAGAAACTTGTAGATTTATCTGCATCACGAGGCTCTATCGATGATATAAGTGTTATGATCATCGAATTACATAACTACATTTGA 669 0.3722 MLANYVCAKASEFAAHNLENNLLEVIKSDHESDIEEAVKNGYLKTDSDFLKEELNGGSCCVTTLIKNGNLIVSNAGDCRAVISSGGVAEALTSDHKPSRIDEKERIETQGGYVDMCRGVWRIQGSLAVSRSIGDRHMKQYVIAEPETKVVRIESHHDLLILASDGLWEKVSNQEAVDIARSFCVGSNRQGPSKACKKLVDLSASRGSIDDISVMIIELHNYI 222
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre6g00883 222 SUPERFAMILY PP2C-like 9 220 IPR036457 -
Trre6g00883 222 CDD PP2Cc 8 218 IPR001932 -
Trre6g00883 222 PANTHER PROTEIN PHOSPHATASE 9 217 IPR015655 GO:0004722|GO:0006470
Trre6g00883 222 Gene3D - 5 221 IPR036457 -
Trre6g00883 222 SMART PP2C_4 3 216 IPR001932 -
Trre6g00883 222 ProSiteProfiles PPM-type phosphatase domain profile. 1 218 IPR001932 -
Trre6g00883 222 Pfam Protein phosphatase 2C 9 211 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre6g00883 Trre-Chr6 6728841 6730036 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre6g00883 9 222 PP2C-type Phosphatase Gene Family AT2G30020 68.519 8.19e-102 298
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre6g00883 K17506 - gmx:100818903 354.369