Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre6g00880 ATGAGGAAAATGTACAATATTGTATGGCTCTTCTGTATAGAAATTTTGTTGCATATTTCAAAATCAAATAGTGGAAAAGTTCCAGCTATAATTGTTTTTGGAGATTCATCTGTTGATTCAGGTAACAACAATTTTATTCCAACAATAGCAAAGAGCAATTTTGCACCATATGGTAGAGATTTTCCAAATGGAATTGCAACTGGTAGATTCTCAAATGGCAGAATTGCCCCTGATTTCATCTCTGAGGCATTTGGACTTAAACCAATTATTCCAGCTTATTTGGATCCTTCTTATAATATATCTGATTTTGCTACTGGTGTTTGTTTTGCTTCTGCTGGTACTGGATATGATAATGATACTGCAAAAGTTGTTGATGTCATACCTTTATGGAAAGAAGTGGAATTCTACAAAGACTACCAAAAGAAATTGAGAGCAACTTTTGGTGATAAGAAAGCTAATGAAATAATAAAGGAGTCTTTATATGTGATTAGCATAGGAACAAATGATTTTCTTGAGAACTATTACACACACCCTGAAAGAAGGATACAATATTTGACTGTTCAACAATATGAGGATTTTTTAATTGGACTTGCTGAGAAATTCCTTAGGGAACTTTATAACCTTGGAGCAAGGAAAATTTCTCTATCAGGGATACCTCCCATGGGGTGTCTACCACTAGAGAGGGCCATAAATATTTGGGGTCGCCATAATTGTGTGGATCATTACAATGATGTGGCTTTGGAATTTAATGCAAAATTGGGATGGTTAGTCACTAAGTTGAACAAGGAGCTCAATGGACTTCAATTGGTAGATGCAAGTGCATATGATATGGTGATGCAAATTGTTACTAATCCTTCTCAATTTGGTTTTGAAGAATCAACAATAGGATGTTGTGGAACAGGTAGATTTGAGATGGGTATCTTTTGTGATGCAGAAAGCCCATTTACATGCAAAAATGCAAATAAGTATGTATTTTGGGATGCTTTTCACCCCTCAGAAAGAACAAATCAGCTAGTATCAAATTATTTAATGCAAAAATATCTTGGCAAGTTTCTCTGA 1059 0.3466 MRKMYNIVWLFCIEILLHISKSNSGKVPAIIVFGDSSVDSGNNNFIPTIAKSNFAPYGRDFPNGIATGRFSNGRIAPDFISEAFGLKPIIPAYLDPSYNISDFATGVCFASAGTGYDNDTAKVVDVIPLWKEVEFYKDYQKKLRATFGDKKANEIIKESLYVISIGTNDFLENYYTHPERRIQYLTVQQYEDFLIGLAEKFLRELYNLGARKISLSGIPPMGCLPLERAINIWGRHNCVDHYNDVALEFNAKLGWLVTKLNKELNGLQLVDASAYDMVMQIVTNPSQFGFEESTIGCCGTGRFEMGIFCDAESPFTCKNANKYVFWDAFHPSERTNQLVSNYLMQKYLGKFL 352
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre6g00880 352 Gene3D SGNH hydrolase 17 347 IPR036514 -
Trre6g00880 352 PANTHER GDSL ESTERASE/LIPASE EXL3 13 343 - -
Trre6g00880 352 FunFam GDSL esterase/lipase APG 19 348 - -
Trre6g00880 352 Pfam GDSL-like Lipase/Acylhydrolase 30 343 IPR001087 GO:0016788
Trre6g00880 352 CDD SGNH_plant_lipase_like 28 347 IPR035669 -
Trre6g00880 352 SUPERFAMILY SGNH hydrolase 159 345 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre6g00880 Trre-Chr6 6697981 6701846 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre6g00880 24 345 Pollen Coat Proteome AT1G75910 37.346 7.14e-71 223
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre6g00880 - - gmx:100778745 553.132