Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre6g00871 ATGGAATACAACAAGTTCAAAATCCGAAGCTATGAGTGTCAATCTGATAGAGTTCAAGTTGAAAATCTTGAGAGAAAATGTGAGGTAGGACCATCACAAAGTGTGTTTCTCTACACAGACACTATGGGTGACCCCATTTGTAGGATTCGAAACAGTCCCATGTTTATGATGCTGGTAGCAGAATTTGAAAATGGATTGGTTGGTGTCATTCAAGGCTCTATAAAAATTGTAACTATTCAAGGACATCCACCAAAAGATTTGGCAAAAGTAGGGTATGTCCTAGGCTTAAGGGTATCTCCACATCATAGAAGAAAAGGGATTGGTTCAAGTCTAGTAAGAAAATTAGAAGAATGGTTCATTTCCAATGATGTGGACTATGCATATATGGCAACTGAAAAAGAAAATCATGCCTCAGTTAATCTCTTCATGAACAAATTTGGCTACACAAAATTTAGGACACCATCAATTCTTGTTAACCCTGTTAACCATCATTCATTTAAAATCTCAACTAACATTGAAATATCAAGGTTGAAAATTGAACAAGCTGAATCACTCTATAGAAAGTTCATGGGGTCCACAGAGTTTTTTCCTAATGATATAGGAAATATATTAAAAAATAAGCTAAGTTTAGGGACATGGATGGCATATTTTAAAGATGATATTAATATTGGGCCTAATGGACAAGTACCAAATAGTTGGGCTATGATTAGTGTTTGGAATAGTGGTGAAATTTTTAAGTTAAAGATAGGAAAAGCACCTTTTTGTTGTTTGTTATACACAAAAAGTTGGTGTTTGATTGATAAAATTTTCCCATGTTTAAAATTACCTACTTTGCCTGATTTTTTTAACCCTTTTGGATTTTATTTTATGTATGGTGTGTATCATGAAGGGCCATTTTCAGGGAAGCTAGTGAGAGCTTTGTGTAAATTTGTGCACAACATGGCTAAAGAGTCTAAAGATGATGAGAAGTGTAAGATTATTGTGACTGAAGTTGGAGGAAGAGATGAACTCAATCATCACATTCCACATTGGAAATTGCTTTCATGTCCTGAAGATTTGTGGTGTATAAAGGCATTGAAAAGTGAAGGGCTTTCAATCAATACTTTTCATGAATTAACAACTAAAACCCCACCAACAAGAGCTCTTTTTGTAGACCCAAGAGAGGTTTAA 1170 0.3462 MEYNKFKIRSYECQSDRVQVENLERKCEVGPSQSVFLYTDTMGDPICRIRNSPMFMMLVAEFENGLVGVIQGSIKIVTIQGHPPKDLAKVGYVLGLRVSPHHRRKGIGSSLVRKLEEWFISNDVDYAYMATEKENHASVNLFMNKFGYTKFRTPSILVNPVNHHSFKISTNIEISRLKIEQAESLYRKFMGSTEFFPNDIGNILKNKLSLGTWMAYFKDDINIGPNGQVPNSWAMISVWNSGEIFKLKIGKAPFCCLLYTKSWCLIDKIFPCLKLPTLPDFFNPFGFYFMYGVYHEGPFSGKLVRALCKFVHNMAKESKDDEKCKIIVTEVGGRDELNHHIPHWKLLSCPEDLWCIKALKSEGLSINTFHELTTKTPPTRALFVDPREV 389
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre6g00871 389 CDD NAT_SF 57 128 - -
Trre6g00871 389 Pfam Acetyltransferase (GNAT) family 48 148 IPR000182 GO:0016747
Trre6g00871 389 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 6 173 IPR000182 GO:0016747
Trre6g00871 389 PANTHER ACYL-COA N-ACYLTRANSFERASES (NAT) SUPERFAMILY PROTEIN 3 389 - -
Trre6g00871 389 Gene3D - 32 155 - -
Trre6g00871 389 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 16 152 IPR016181 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre6g00871 Trre-Chr6 6652075 6653690 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR GNAT Trre6g00871 Acetyltransf_1 2.8e-16 CL0257
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre6g00871 - - psat:127084517 738.028