Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre6g00853 ATGGCTGCTGAGCAAGGTGATAGATTTTCCTTCATTGAAGTACCACTTTTGGATGATGAAAAAGTGTACCAAATTAATGGTTCAAAAACTAAGGATGAACACCACACGGTTCATGAGGGTAACACTTCTTTATTCAAGACTTGCTTCCATCTTGTTAATGGCATCTCAGGAGTTGGTATTGTCTCAATACCTTATGCACTAGCATCAGGAGGATGGTTAAGCATAATCCTACTATTTACAATAGCCATAGCATGTTGTTACACAGGAACATTGGTCAAAAAATGCATGGACATGGATCTTAATATAAGAACCTTCCCTGACATAGGTCAATATGCATTTGGATCAAAAGGAAGATTAATGGTATCAATAATCATGAATTCAGAACTTTATCTAGCAGTAACAGGTTTTCTTATTCTAGAAGGAGACAACCTTAACAAACTAATACCAAATATGGAAATTAACATAGGTGGTTTAACAATTGGTGGTACAACAATGTTTACTATGATTACTACAATTGTTATTTTGCCTACTGTTTTGTTTGAGGATATGAGTTTGTTGTCTTATGTTTCTGCTAGTGGTGCTATAGCTTCTTCAATCTTCATTTTGTCTTTGTTTTGGAATGGTGCTGTTGATGGAACAGGGTTTCATGGTAAAGGAAGAGTTTTTAATTTGAGTGGAATACCTTCTGCTGTTAGTTTATATGCTTTTTGTTATAGTGCTCATCCGATTTTGCCGACTCTCTATAATTCTATGAGGAATAAAAGTCATTACTCCGGGGTCCTATTTATAAGCTTTTTAGCATGCACATTTGGTTATGCAGCAGCAGCAATTCTAGGCTACTCAATGTTTGGACAAGAAGTTGAATCACAAGTAACTCTAAACCTCCACACAGGAAAATTAAGTTCAAGAATAGCAATATACACAACCTTAGTTAATCCAATAGCAAAATATGCATTAATGCTTACACCAGTCATAAATGCAATAAAAATGAAAGTTTCATGCAATTACTCTAACAAAAGGGTCACACATATGATTATTAGTACATCATTATTAGTAAGCTCTCTTATTATAGCAGTGACTATTCCTTTATTTGGATACCTTATGTCACTTGTTGGAGCATTGTTAAGTGTCTCAGCTTCAATTTTGGTTCCATCAATTTGTTACTTGAAGATTTCTGGAGCTTACAAGAGATTTGGATCTGAAATGATTGTTAACTATTTGATTATTGTGATGGGGGTTGCTATTGCTGTTTTTGGTACTTATAGAGCACTTGTAGATATAATTCAAAACTTGTAA 1296 0.3434 MAAEQGDRFSFIEVPLLDDEKVYQINGSKTKDEHHTVHEGNTSLFKTCFHLVNGISGVGIVSIPYALASGGWLSIILLFTIAIACCYTGTLVKKCMDMDLNIRTFPDIGQYAFGSKGRLMVSIIMNSELYLAVTGFLILEGDNLNKLIPNMEINIGGLTIGGTTMFTMITTIVILPTVLFEDMSLLSYVSASGAIASSIFILSLFWNGAVDGTGFHGKGRVFNLSGIPSAVSLYAFCYSAHPILPTLYNSMRNKSHYSGVLFISFLACTFGYAAAAILGYSMFGQEVESQVTLNLHTGKLSSRIAIYTTLVNPIAKYALMLTPVINAIKMKVSCNYSNKRVTHMIISTSLLVSSLIIAVTIPLFGYLMSLVGALLSVSASILVPSICYLKISGAYKRFGSEMIVNYLIIVMGVAIAVFGTYRALVDIIQNL 431
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre6g00853 431 PANTHER AMINO ACID TRANSPORTER 34 421 - -
Trre6g00853 431 Pfam Transmembrane amino acid transporter protein 41 422 IPR013057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre6g00853 Trre-Chr6 6520238 6525138 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre6g00853 28 428 Amino Acid or Auxin Permease AAAP Family AT3G28960 53.367 9.91e-152 434
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre6g00853 K15015 - gmx:100784690 609.757