Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre6g00848 ATGGCTTCAGCATTGGAATGTTGGTCAAGACGAGGCAACAACAACAACCACAACAACAACAACGATGAAGAAGATATGGTAGAACAAGTTCTAATGGAAACAAACCCATCTTCACAATCACAACCCAACAACAAAGACTCTTCAATCATTCACAAGAAGTTCAACAAACTCACTCGTAATGTTTCTGAAGCTATTGCTTCACTCAAAAACACTCTCAACATTAACCTTAATCTTGATTCTTCCAAACCCGACAACAACAACAACAGCACTTGTCGAAGTAGTAACAATAACCTCGTTTGGGGAACTGTTGTCAGAAATCTTACTCAGCTTTATCCTGGTAGTCAACTTCCTGAGAAGCTCATGTCCAACATTCGCAAGCACTGTGATTCTTTGCCTCCTAGTTATTCTCAGGCCGGTTTTGATGTTAAAGATGTGTTTCTTCACATCAAGCTGATTGAGCAAACTTTGGAAGATTCACAAGCTGCAATTTTGATTGAAGAAGAGTGTGACGGTGAAATGCAGCTTCAAGGGTCTTTGTTCAAGTTGACATTTGCTTGCAACTCTCCAATTTCGTGGCCTGCAATGTCGAGTGCGTTGGATAGTTCCTCCATTTGTTGCAAGAAGATTCAGATCTTTGAGAAGAAAAGTCTCACCCTTGGAATTGTACTTCTACTTGTTCTCTCTGGGGCTGGACAAGATAAGTTGGTAAGGACTCGAGTTGAAAGTGCTCTTAAGTTTGCCATGAAGAAGCCTAAAGCCAGTGTTGTGAAGCTTCCCTTTGGGCTTTGTGGATGTCAAGAGGAGAATTTCAAGGGGAGAGAGTTTGGAGAGATTGAAGAGAATTGTAGCGGTGTATACTGCGGAAACGGATTTGAGAATTTGAGCCAAAAGATTCATCTCGAAATGCCATTGCCTAATTCATTGTTTCATGTATCGGTGGACGAGTGGCAGACTATTTTGACAGATGCTGATGAGATGCAAAAATGGTTGTTAAACTCAGATAGACTTGAGTTCTCGGAACAGATCGGACACAATTCATATAAAGGATCCTACATGGGGAAAAAAGTTGGCATTGAGAAGTTCAGAGGGTGCGACAAAGGGAACTCGTATGAGTTTGTGCTCAGGAAAGATCTGCTAGAATTGATGACGTGCGGACATAAAAATATTCTGCAGTTTTGTGGTGTATGTGTAGATGACAATCACGGGCTATGCGTAGTGACAAAATTCATGCAAGGTGGATCTGTTCATGACTTGATTTCAAAGAACAAGAAACTTCAGAACAAGGATATTGTAAGAATTGCAGTTGATGTGGCCGAGGGGATCAAGTTTATGAATGATCACGGTGTTGCATATAGAGACCTTAATACTCAGAGGATTATGTTGGATAAACATGGGAGTGCTTGCTTGGGAGATTTGGGTATAGTTACTGCCTGCAAGAGCAACCAAGAAGCAATGGATTACGAAACTGATGGTTACCGGTGGCTAGCTCCAGAGATAATTGCCGGCGACCCTGAGAGTGTCACCGAGACATGGATGAGCAATGTTTATAGTTTCGGCATGGTAATTTGGGAGATGGTATCCGGTGAAGCAGCCTATACTGCATATTCACCCGTGCAGGCAGCAGTAGGCATTGCAGCTTGTGGCCTTAGACCTGAGATCCCAAAGGACTGTCCACAAATTCTAAAATCTTTAATGACAAAATGCTGGAACAACACCCCTTCAAAACGCCCCGAATTCTCCGAAATATTAGCGATACTGCTGCGACACAACAACAACAATAAGTAA 1785 0.4218 MASALECWSRRGNNNNHNNNNDEEDMVEQVLMETNPSSQSQPNNKDSSIIHKKFNKLTRNVSEAIASLKNTLNINLNLDSSKPDNNNNSTCRSSNNNLVWGTVVRNLTQLYPGSQLPEKLMSNIRKHCDSLPPSYSQAGFDVKDVFLHIKLIEQTLEDSQAAILIEEECDGEMQLQGSLFKLTFACNSPISWPAMSSALDSSSICCKKIQIFEKKSLTLGIVLLLVLSGAGQDKLVRTRVESALKFAMKKPKASVVKLPFGLCGCQEENFKGREFGEIEENCSGVYCGNGFENLSQKIHLEMPLPNSLFHVSVDEWQTILTDADEMQKWLLNSDRLEFSEQIGHNSYKGSYMGKKVGIEKFRGCDKGNSYEFVLRKDLLELMTCGHKNILQFCGVCVDDNHGLCVVTKFMQGGSVHDLISKNKKLQNKDIVRIAVDVAEGIKFMNDHGVAYRDLNTQRIMLDKHGSACLGDLGIVTACKSNQEAMDYETDGYRWLAPEIIAGDPESVTETWMSNVYSFGMVIWEMVSGEAAYTAYSPVQAAVGIAACGLRPEIPKDCPQILKSLMTKCWNNTPSKRPEFSEILAILLRHNNNNK 594
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre6g00848 594 Gene3D Transferase(Phosphotransferase) domain 1 329 592 - -
Trre6g00848 594 ProSiteProfiles Protein kinase domain profile. 336 592 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre6g00848 594 SUPERFAMILY Protein kinase-like (PK-like) 311 586 IPR011009 -
Trre6g00848 594 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 59 586 - -
Trre6g00848 594 MobiDBLite consensus disorder prediction 1 22 - -
Trre6g00848 594 PRINTS Tyrosine kinase catalytic domain signature 513 535 IPR001245 GO:0004672|GO:0006468
Trre6g00848 594 PRINTS Tyrosine kinase catalytic domain signature 557 579 IPR001245 GO:0004672|GO:0006468
Trre6g00848 594 PRINTS Tyrosine kinase catalytic domain signature 407 420 IPR001245 GO:0004672|GO:0006468
Trre6g00848 594 PRINTS Tyrosine kinase catalytic domain signature 443 461 IPR001245 GO:0004672|GO:0006468
Trre6g00848 594 Pfam Protein tyrosine and serine/threonine kinase 377 585 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre6g00848 Trre-Chr6 6473917 6476980 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre6g00848 323 586 MAP Kinase Kinase Kinase AT2G17700 33.942 5.25e-50 179
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-7 Trre6g00848 PK_Tyr_Ser-Thr 3e-42 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre6g00848 - - gmx:100811417 902.123