Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre6g00834 ATGTCAAAGACAGTTTGTGTCACCGGAGCCAGCGGAGCCATCGGTTCATGGGTGGTTCGTCTCCTCCTGGAACGCGGCTACATCGTCCACGCCACCATCCAAGATCTCGAGGATGAGAACGAGACAAAACATTTGGAAGCAATGGAAGGGGCAAAGGGTCATCTTAAATTTTTCGAAATGGATCTTCTTAACAGTGACTCTATTGCGGCCGCCGTGAAAGGTTGTGCCGGAGTTATACATCTTGCATGTCCTAACATCATTGGTGAAGTCAAAGACCCCGAGAAGCAAATTTTGGAACCGGCGATTCAAGGAACGGTTAATGTGTTGAAGGTGGCAAAGGAAGCAGGGGTGGAGCGTGTGGTGGCGACGTCGTCGATCTCCGCCATCATACCGAGTCCTAATTGGCCAGCTGATAAGATTAAGGGAGAAGATTGTTGGACGGACCTTGATTATTGCAAGGAAAAGAAGTTATACTACCCCATTGCAAAGACACTAGCAGAAAAAGCTGGTTGGGAATTTGCTAAAGAGACCGGTTTTGATGTTGTTATGATTAACCCTGGTACTGCTTTGGGCCCTTTGATTCCACCAAGAATTAATTCAAGCATGGCTGTTCTTGCTGGTGTTCTCAAAGGTGACACGGAGACATATGAGGACTTCTTCATGGGAATGGCCCATTTTAAAGACATAGCTTTGGCACATATTTTGGGTTTTGAGCAAAAGAAAGCATCTGGGAGGCATTTGTGTGTGGAAGCTATTCGTCACTATAGTGATTTTGTCAATTTGGTTGCAGATTTATACCCTGAATATAATGTTGCAAAGTTGCCAACGGATAAACAACCTGGATTGTTGAGAGCAAAGAATGCATCAAAGAAGCTGATTGAATTAGGTCTAGAGTTCACTCCAGCTGAACAAATTATCAAGGATGCAGTTGAGTGTTTGAAGAGCAGAGGTTTAGTTTAA 960 0.4458 MSKTVCVTGASGAIGSWVVRLLLERGYIVHATIQDLEDENETKHLEAMEGAKGHLKFFEMDLLNSDSIAAAVKGCAGVIHLACPNIIGEVKDPEKQILEPAIQGTVNVLKVAKEAGVERVVATSSISAIIPSPNWPADKIKGEDCWTDLDYCKEKKLYYPIAKTLAEKAGWEFAKETGFDVVMINPGTALGPLIPPRINSSMAVLAGVLKGDTETYEDFFMGMAHFKDIALAHILGFEQKKASGRHLCVEAIRHYSDFVNLVADLYPEYNVAKLPTDKQPGLLRAKNASKKLIELGLEFTPAEQIIKDAVECLKSRGLV 319
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre6g00834 319 CDD FR_SDR_e 5 297 - -
Trre6g00834 319 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 1 313 IPR036291 -
Trre6g00834 319 Gene3D - 1 319 - -
Trre6g00834 319 PANTHER NAD DEPENDENT EPIMERASE/DEHYDRATASE 3 310 - -
Trre6g00834 319 Pfam NAD dependent epimerase/dehydratase family 5 197 IPR001509 -
Trre6g00834 319 FunFam Cinnamoyl-CoA reductase 1 1 319 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre6g00834 Trre-Chr6 6383523 6387637 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre6g00834 3 319 Monolignol Biosynthesis Gene Families AT5G58490 64.984 8.13e-160 447
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre6g00834 - - gmx:100806281 542.347