Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre6g00828 ATGAACAGTGCCACCATTGATGCTATCGAAGAAAACGGACATGGAAGCGATTCGGACGCGAATTCCGATGATGCATCGGAATACTACCAACCGATATCGGCGGTAGACGAAGACGGAAGCTCAGACGGAGAGAACGGAATTGAATTCCAGCAACTTCCGAACGGAAACAGTGCACACGGAGGAGCAGAGAACGGTATATCGATGCTGGATCTGAACGACGGCGTAGATCAGAAGAGTAGTGACGAAGAGGAAGAAGAGGAAAGGAGCAGAGAAGAATTTGAAAATGAGATTCGGAGAGCATTGAGGGAAGATGAGAATCGGAGGAACGCGCCATTACCGGTTGAGAATGCGACGAGACTGATGGAGGCGATGCGTGGAGTTTCGTTTGTTGGAGAAGTTCCTCCATGGGCTTCAGAAGTTCCTGTTGATCGTTGGATTGATCAAATTCGTAGACGGAGACAATCACCAAATACTTGA 477 0.4843 MNSATIDAIEENGHGSDSDANSDDASEYYQPISAVDEDGSSDGENGIEFQQLPNGNSAHGGAENGISMLDLNDGVDQKSSDEEEEEERSREEFENEIRRALREDENRRNAPLPVENATRLMEAMRGVSFVGEVPPWASEVPVDRWIDQIRRRRQSPNT 158
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre6g00828 158 Pfam Male enhanced antigen 1 (MEA1) 27 154 - -
Trre6g00828 158 Coils Coil 83 110 - -
Trre6g00828 158 MobiDBLite consensus disorder prediction 1 94 - -
Trre6g00828 158 PANTHER BNAA08G28800D PROTEIN 3 157 - -
Trre6g00828 158 MobiDBLite consensus disorder prediction 44 61 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre6g00828 Trre-Chr6 6337859 6338427 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre6g00828 10 155 Chloroplast and Mitochondria Gene Families AT1G07020 48.344 3.37e-32 110
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre6g00828 - - lang:109344979 187.963