Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre6g00824 ATGGTGAAACATAATCATGGTGCAACACTTTCTTCTGTTGCCATTTTGTGTCAAGAACAAACCAATTTTCACCCTGATGGCATCTTTTATGGTGACAATCCCTTAAGTCACTCCTTCTCAATACTTATTTTCCATCTCATTCTTATTACCACCATCACACGTATTATTCGTTTTCTTCTTAAACCTCTTAAACAACCTATAATCATTTCTCAAATAATTGGTGGTGTCATTGTTGGACCATCCTTTCTAGGACGAAGCAAATGGTATCATCGACATATAAAACCGGAGGCGGCGCAATTCCTAATGAACAACCTAGGAATTATGGGGTTCATGTTCTTTGCGTTTGTCTATGGAGTGAAAATGGATCCAAGTTTATTGAAAAAATCAGGAAAAATGCATGTATCAATAGCATTAACAAGCATAACAATTCCAACATTATTAGTATATGTTGTAGCACTATCTTTAAGAAAACAAATGGACAAAGATTTAAGTGCAATTTCATCAATAGGAGTAATAGCAGGATACTTAGGAATAACAGCATTTCCTGTTCTATATCATGTCCTAAAAGAGCTTAACCTTCTAAACTCGGACGTGGGTCGATTTGCATTATCGACCGCATTAATCGGAGATACAATTGGAATGGGTAGCATTTTAGCATTTGAAGCAGAAAGACAAGGACAAACAAGAGCAGAGAATGCTCTTTGGTTTATGCTTTCAGCTATAGTTTTAGTAACAATTTTATTATGTTGTGTTAGGCCAGCAATGATATGGATTAATCACAAAACACCAGAAGGACAACCAGTGGATCAATCTTTTATTGTTGCAATTCTTTTAGGAATTTTTGTGATGGGCTTTATAACTGATATGTTTGGTATAGCAATTGTTAATGGGCCATTGTGGTTGGGCTTAGCAGTTCCTGATGGGCCTGGTTTAGGAGCAACATTGGTGCGTAAGAGCAAGACATTTATGAATGAGTTTCTTATGCCATTTTCTTTCATTTTGGTTGGACAATATGTTGATTTTTTTGCATTGGGAGCTTCTGAATGGAAAAGCTTGAAACCTTTGTTTTTCATGGTTTTGACTGGTTACTTGGCCAAATTCTTTGTAACTTGGATGGCTGCATTGTATTGGCGTATGCCATTTAGAGATGGCTTAACTTTTAGCCTCATTATGAGCTTAAGAGGACAAATTGAACTTATCTTGTTTGTGCATTTGATGGACAAAAAGGTCATCAATGTACCAGGCTTCACATTATTGGTAATAATGACAATAATATTGACAGCAACTTTCACTCCTCTAGTCTCCATTATATATGATCCAACAAGACCATACATATTGAACCAAAGGAGGAACATTCAACACAATCCACAAGGTGTAGAACTCAGAATAGTTTTATGCATTTTCGACACCGAAAATACGAACGGATTACTCCATCTACTTGATGTTACCAACCCAACCTCAAGCACCCCAATTTCAATTTCTTCTCTTAGACTATTTGAGCTTACGGGCCGCGCTAACCCTTTATTCATCGATCACGCGAAACAAGAAGTTCCTCCAATATATCAATCGACACACACCATAAATGCACTTGGAAGTTTCCAACATATCAGAAGAGAGTTTATGAAAATTCAATTTTTCACTGCCGTGGCTCCCAAGCAATCAATGTTCCAAAACATCTGCGAACTCGCACTCGAACAAGAAGCGTCACTAATCATCTTGCCTTTCATTAATAGAGGATTTTATGACCATGGAACAAGAAGAACAGCGAATTCACAAGTCTTGAATCATGCACCTTGTTCTATTGCAATTCTTGTTGACAAAGGTACTTTTGATATTACCGGGGTAGGAAATTCGACGCGGCATTCTAGAAATCGGTTTGCCGTGTTGTTTCTTGGAGGTGCTGATGCTAGAGAAGCACTTGTTTATGCAGATAGGATGGTAGCAAACGAGGACGTGTCGCTTACCGTTGTACGGTTTCTTTCTTACAACAATGTAGGGGATAATGAAAGGGAGAAGAAGCTTGATGATGGAATTGTGACATGGTTTTGGGTGAAGAATGAGGTGAATAGTAGAGTTGTGTATAGAGAGGTTGTGGTTAGGAATGGTGAAGAAACAATTGGAGCAATTAATGATATGAATGATGGTGGTTATGATCTTTTGATAGTTGGAAGGAAACATGGGATTAATCCTGCTATTCTTACAGGATTATCTGAATGGAGTGAAAGTGATGAGTTAGGACTTATTGGTGATTATGTTAGTTCTAAAGATTTTGATGGCTCAGCTTCTGTTTTAGTGGTACAACAACAAGTCCTAAGAGGTTAA 2322 0.376 MVKHNHGATLSSVAILCQEQTNFHPDGIFYGDNPLSHSFSILIFHLILITTITRIIRFLLKPLKQPIIISQIIGGVIVGPSFLGRSKWYHRHIKPEAAQFLMNNLGIMGFMFFAFVYGVKMDPSLLKKSGKMHVSIALTSITIPTLLVYVVALSLRKQMDKDLSAISSIGVIAGYLGITAFPVLYHVLKELNLLNSDVGRFALSTALIGDTIGMGSILAFEAERQGQTRAENALWFMLSAIVLVTILLCCVRPAMIWINHKTPEGQPVDQSFIVAILLGIFVMGFITDMFGIAIVNGPLWLGLAVPDGPGLGATLVRKSKTFMNEFLMPFSFILVGQYVDFFALGASEWKSLKPLFFMVLTGYLAKFFVTWMAALYWRMPFRDGLTFSLIMSLRGQIELILFVHLMDKKVINVPGFTLLVIMTIILTATFTPLVSIIYDPTRPYILNQRRNIQHNPQGVELRIVLCIFDTENTNGLLHLLDVTNPTSSTPISISSLRLFELTGRANPLFIDHAKQEVPPIYQSTHTINALGSFQHIRREFMKIQFFTAVAPKQSMFQNICELALEQEASLIILPFINRGFYDHGTRRTANSQVLNHAPCSIAILVDKGTFDITGVGNSTRHSRNRFAVLFLGGADAREALVYADRMVANEDVSLTVVRFLSYNNVGDNEREKKLDDGIVTWFWVKNEVNSRVVYREVVVRNGEETIGAINDMNDGGYDLLIVGRKHGINPAILTGLSEWSESDELGLIGDYVSSKDFDGSASVLVVQQQVLRG 773
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre6g00824 773 PANTHER CATION/H + ANTIPORTER 17 769 - -
Trre6g00824 773 FunFam Cation/H(+) antiporter 24 40 445 - -
Trre6g00824 773 Gene3D - 40 442 IPR038770 -
Trre6g00824 773 Pfam Sodium/hydrogen exchanger family 46 434 IPR006153 GO:0006812|GO:0015297|GO:0016020|GO:0055085|GO:1902600
Trre6g00824 773 Gene3D - 474 739 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre6g00824 Trre-Chr6 6297275 6300500 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre6g00824 16 770 Antiporter Super Family AT5G58460 44.036 0.0 686