Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre6g00821 ATGGCTGAAAACGGCGAAGAGAAATTACTCGCTGTGGCGCGCCACATAGCAAAAACGCTAGGCCAAACAAACAACAACATGGCCGATGATATTCTTCAGATATTCTCAAATTTCGACGGTAGATTTTCTAAGGAGAAACTTTCTGATGAAGGTGTAGGGAATGATACCGTACGCTGTGCTGCACTTGAACAAACTGTTAATTCTCTTGACCGTCAGATTTCGGATCATCTTTCGTCGGAAAATTCTGTTTGTTGTAACTCCACCGCGTTTCTCTCCGTCGTTGACGAGCTCGTTTCGACGATTGAAGATTGGAGTCCTCTTTCCGATGATAAGGTTGTCGGCGCGTGTTTACAACGCGCTGATGATATTCTTCAGCAGGCTATGTTTCGTGCGGAGGAAGAGTTTCGGTCACTCATGGAAATCGGTAGTGAGTCGTTTGACGTGACTCGGAACAGCGACGAGTTGACTCAGAACGGTAGTTCGTTGTATGATTCGAATGGTGAGGAAGATGAAGAAATTGACGGTGATGTGGATGTGATTCCTGTGGCGAAGGCGGTTGTTGATTACGATGTTGTGATTGACGCGTTACCTCCGGCGACGGTTAACGATATCCGGGAAATCGCGAAACGGATGATTGCGGCGGGGTTTGGGAAGGAGTGCTCGCATGTTTACGGTGGTTGTAGGAGGGAGTTTTTGGAGGAGAGTTTGTCGAGGTTAGGGTTACAGAAATTGAGCATTTCGGAGGTTCACAAGATGCCATGGCAAGAGCTTGAAGACGAGATTGAACGATGGATTAAGGCTTCAAATGTCGCTCTCAAAATCCTCTTCCCAAGTGAGCGGCGTCTCTGCGATCGTGTCTTCTCCGGTTTATCTTCGTCATCGGCAGCCGCTGATCTTTCCTTCATGGAAGTCTGTCGTGGATCAGCAATTCAGTTGCTGAATTTCGCCGATGCTGTAGCAATAGGTAGTCGCTCGCCGGAACGGTTGTTTAGAGTCCTCGATGTGTTTGAGACTATGCGTGACCTAATTCCTGAATTCGAATCCTTGTTCTCCGATCAGTATTGCTCGTTCCTTGTTAACGAAGCAATCACGATTTGGAAGAGGTTAGGAGAAGCTATTAGAGGAATTTTCATTGAATTAGAGAATCTGATTAGTCGTGATCCGGTGAAGGCGGTTGTTCCTGGCGGAGGGCTTCATCCAATCACTCGTTACGTAATGAATTATCTCCGCGCTGTGTGTCGGTCGCACCAAACCCTTGAACTTGTTTTCCAAGACAATGCACTTTCATTGAAGGATTACCCTAAGCATGATGATAAGTTACAATCAAATTCTTCATTTGCTGTTCAAATATCATGGATTATGGACTTGTTAGAACGAAATTTGGAAGCAAAGTCTAAATTTTACAAAGACCCTGCTTTGTGCTCTGTTTTTATGATGAATAATGGGAGATACATCGTTCAGAAGACTAAAGACAGTGAATTAGGGACACTTTTGGGTGATGATTGGATCAGAAAGCACAGTGCCAAAATTCGGCAATGCCATATGAACTATCAAAGAAGCTCATGGAACAAGTTGTTTGGGTTTCTGAAGGTGGATACAATGGCTGCAAAACCCATGAAGGAGAAACTAAAGATGTTCAATCTGCATTTCGAAGAAATATGTAGGGTTCAATCTCAGTGGTTTGTCTTTGATGAGCAACTGAGGGAAGAATTAAGGATCTCCATCGAAAAGCTCTTGTTGCCTGCATATGGAAGCTTTATTGGAAGATTTCGAATTGTTCCAGAGCTTGCTAAGAATAGTGATAAGTATATCAAGTTTGGAATAGAGGACGTTGAAGCTCGGCTTACCACTTTGTTTCAGGGAAGCGGTGGATCAAATGGTGGCCGAAAATGA 1893 0.4437 MAENGEEKLLAVARHIAKTLGQTNNNMADDILQIFSNFDGRFSKEKLSDEGVGNDTVRCAALEQTVNSLDRQISDHLSSENSVCCNSTAFLSVVDELVSTIEDWSPLSDDKVVGACLQRADDILQQAMFRAEEEFRSLMEIGSESFDVTRNSDELTQNGSSLYDSNGEEDEEIDGDVDVIPVAKAVVDYDVVIDALPPATVNDIREIAKRMIAAGFGKECSHVYGGCRREFLEESLSRLGLQKLSISEVHKMPWQELEDEIERWIKASNVALKILFPSERRLCDRVFSGLSSSSAAADLSFMEVCRGSAIQLLNFADAVAIGSRSPERLFRVLDVFETMRDLIPEFESLFSDQYCSFLVNEAITIWKRLGEAIRGIFIELENLISRDPVKAVVPGGGLHPITRYVMNYLRAVCRSHQTLELVFQDNALSLKDYPKHDDKLQSNSSFAVQISWIMDLLERNLEAKSKFYKDPALCSVFMMNNGRYIVQKTKDSELGTLLGDDWIRKHSAKIRQCHMNYQRSSWNKLFGFLKVDTMAAKPMKEKLKMFNLHFEEICRVQSQWFVFDEQLREELRISIEKLLLPAYGSFIGRFRIVPELAKNSDKYIKFGIEDVEARLTTLFQGSGGSNGGRK 630
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre6g00821 630 PANTHER EXOCYST COMPLEX PROTEIN EXO70 61 621 IPR004140 GO:0000145|GO:0006887
Trre6g00821 630 Pfam Exo70 exocyst complex subunit 262 616 IPR046364 GO:0000145|GO:0005546|GO:0006887
Trre6g00821 630 Gene3D Exocyst complex component Exo70 76 627 - -
Trre6g00821 630 SUPERFAMILY Cullin repeat-like 86 619 IPR016159 -
Trre6g00821 630 FunFam Exocyst subunit Exo70 family protein 74 626 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre6g00821 Trre-Chr6 6269189 6271081 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre6g00821 1 630 EXO70 exocyst subunit family AT5G58430 66.719 0.0 845
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre6g00821 K07195 - csav:115721257 863.988