Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre6g00818 ATGGAGTCAGACCAAAACAATCTCATTAGCAACAATTCTATGTCTGATGGAACAGAGACACAGTTTGGAGGATCATTCATATGTCATACAATTAATCATATCAACTCCAAGGGATTTTGGTTAGGAGAAAACCCACTTGCTTTTTCTGTCCCTCTTTTCTTGATCCAACTTTTTCTTATGTTCATTTTCACACGCTTCAGTTTCCTTATTCTCAAGCCTTTTGGTCAACTTTCTTTTGTTTCTCAGATTCTTGGTGGTGTGACACTTGGTCCTTCAATTCTTGGTCACAACTCATCATTTGCCAACAATTTTTTCCCAATAACAGGACGAAATTTACTCGACACAGTAGCATTTTTTGGTTATATGTTATTCATCTTCATACTTGGAGTAAAGATAGATCCAACCATCATTTTCCGATCAGGTAAAAGGACGTTCGCCATTGGAATTTTAAGCTTCTTTGTTCCTTACACTCTCGGTGGAACTGTAGCTTTAATCCTCAGCCACTTTGCATCATTGGATAAGGATGTTTTGAGAGTACTTCCTATTGTGGTAGAAGTTCAATGTATCACAGCCTTTCCAGTAATTTCTTGCTTTCTTGCTGAACTTCAGATCCTCAATTCAGAGATTGGACGGTTGGCTTCGTCTTCTTCGCTAGTATGCGACGTTTGCTTCTGTATAGTTTCAACAATGAAATTTGCTGCAAATCTATCATCAACAAAGTCAATAGGAGTAACCATTGGATCGCTCTTTTCAACCGCTGTTCTTATTTTATTCATTTTTTTTGTTGTTCATCCAGCTGCATTATATGCAATTCAACGCACGCCAGAGGGAAAACCGGTTCAAGAAATTTACATTTGTGGAACTCTTATAACACTAATGTTTTGTGGATTCATCGGTGAAGTTATCGGTATAGATGCAATCGTTATATCATTTATGGTAGGGTTGGCTATACCAGATGGTCCTCCATTAGGTGCAGCATTAGTAGATAAGCTTGAGTGTTTTGTTTCGGTTGTGCTTTTACCGTTACTTTTTGCGGTCGTTGGATTGAGGACGGATGTTTTTGCTATACAGAAGATGAAGAATTTGTGGATAATTCAGTTGATTATTTGCATTGCATTTATTGGTAAGATTATTGGAGCTTTGTTGCCTCTACTTTTCTGTAGGATGCCATTTAGAGATGCTCTTTCTCTTGGTCTTATAATGAACTGCAAAGGCACTGTCGAATTGGCCTTGTTGATTAATTTGAGATTAAGAAATGTTCTGAATGATGAACTGTTTGCAATTATGATTCTTACTTTGGTGCTTGTAACCGGCATTGTATCGCCTGTTGTGAAAGCTCTATATGATCCTTCTAGAAGGTTCCTTGCTTACAAAAGGAGGACAATATTGCATCACCAAAGCAATGAAGAATTGCGCATACTAGCTTGCATTCACAAACAAGATAATGTGTTGGCTATTTTTAACCTACTTTCTGCTTCGAATCCAACCGAAAAAAATCGCATTGATTTAGTTGTACTACAACTTGTTAAGCTTGTGGGAAGAGCTTCATCGGTGCTTGTTGCGCACATACCGCGCGAAAAGCCAAGCGATAAAATCTTCAACGCATTCAGCAAATTTGAAGATGCTTATAGAGGAAAGGTATCACTACATTGCTATAAAGGTATCTCACCCTATGCTACAATGCACAATGATGTGTGCTACTTAGCACTTGAAAAAAGAATAACTTTCATAATCATACCTTTCCATAAACAATGGATAATCGGAGGTATGGCCGAGTCGTCTTTCGCATTCAAGCAACTCAACAAGAATGTTCTCGAGAAAGCTCCTTGCTCGGTCGGTGTCCTCATTGATCGCGGCAACCAGAAGAAATTTTGGTGCGGATATATGAACGAATCGACATATCTAGTTGCCGTTTTTTTCTTTGGAGGTGCAGACGATAGAGAAGTGCTCGCGTACGCGAAACGTATGTTGGATCAACCTAATGTAAATATTACACTCTTTCAATTTACGTCTTCGAAAGATATTGTTGGTGGTACAGAAAGAAGCAAAAAGCTTGATACTCAAATATTAAGTGAGTTTAGGCTAAGTGCTTTTAGGAATGATAGAGTTTCTTATAAAGAAGAAGTTGTAATGAATGGAAGAGATGTTCTTTCAGTTATTGAAGACATGGAGAGTTTTTATGATCTTGTTATGGTTGGAAGGAGGCATGAAGATTCACAGTTAATGGCTGAACTTACAAAATGGAAGCATGGAGAGTTGGGAAGTGTAGGAGAGATTCTTGCTTCTTTGAATATTGGAGATAAAACTTCAATTTTGGTTGTGCAACAACAAACTAGATTTTGGGGGTCACGTGATCCAGAGGAATCTACACATTTGAGAAGAGTAAATATATAG 2394 0.3797 MESDQNNLISNNSMSDGTETQFGGSFICHTINHINSKGFWLGENPLAFSVPLFLIQLFLMFIFTRFSFLILKPFGQLSFVSQILGGVTLGPSILGHNSSFANNFFPITGRNLLDTVAFFGYMLFIFILGVKIDPTIIFRSGKRTFAIGILSFFVPYTLGGTVALILSHFASLDKDVLRVLPIVVEVQCITAFPVISCFLAELQILNSEIGRLASSSSLVCDVCFCIVSTMKFAANLSSTKSIGVTIGSLFSTAVLILFIFFVVHPAALYAIQRTPEGKPVQEIYICGTLITLMFCGFIGEVIGIDAIVISFMVGLAIPDGPPLGAALVDKLECFVSVVLLPLLFAVVGLRTDVFAIQKMKNLWIIQLIICIAFIGKIIGALLPLLFCRMPFRDALSLGLIMNCKGTVELALLINLRLRNVLNDELFAIMILTLVLVTGIVSPVVKALYDPSRRFLAYKRRTILHHQSNEELRILACIHKQDNVLAIFNLLSASNPTEKNRIDLVVLQLVKLVGRASSVLVAHIPREKPSDKIFNAFSKFEDAYRGKVSLHCYKGISPYATMHNDVCYLALEKRITFIIIPFHKQWIIGGMAESSFAFKQLNKNVLEKAPCSVGVLIDRGNQKKFWCGYMNESTYLVAVFFFGGADDREVLAYAKRMLDQPNVNITLFQFTSSKDIVGGTERSKKLDTQILSEFRLSAFRNDRVSYKEEVVMNGRDVLSVIEDMESFYDLVMVGRRHEDSQLMAELTKWKHGELGSVGEILASLNIGDKTSILVVQQQTRFWGSRDPEESTHLRRVNI 797
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre6g00818 797 Gene3D - 52 454 IPR038770 -
Trre6g00818 797 PANTHER CATION/H + ANTIPORTER 27 779 - -
Trre6g00818 797 Pfam Sodium/hydrogen exchanger family 61 444 IPR006153 GO:0006812|GO:0015297|GO:0016020|GO:0055085|GO:1902600
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre6g00818 Trre-Chr6 6246813 6250273 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre6g00818 14 797 Antiporter Super Family AT2G13620 38.631 0.0 542
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre6g00818 K26731 - gmx:102665255 1172.92