Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre6g00809 ATGAAAGATGTTGAACTTGTAAAACCATCAAAGTTCACTCCTTCTTGTATTCTTTCTCTTTCTACACTTGACAATAGAGGTATCTATAATAACCATTGTCAAACTGTTCATGTATATCGATCATCAGAAACTCGTGATTTTGATTCCAGTTTTAACCTTTGTCATGTATTCAAAGAAGCACTCTCAAAGGCTTTGTTCTATTATTATCCTTTTGCAGGTAGACTAATGAAACATGCTGATGATGGAAAACTTAGAGTCAATTGCAACCCTGATGCAGAAAACTATGGTGTTCCATTCTTGGAAGCAATTGCTAATTGCACCCTTTCTTCAATAAATTATTTAGACAATACTGACACAGAAATTGCAAAGCATTTGGTGCTTAATCCTCAAGATTTAAGTTATCCTTTAGTGTTCAAGGTAACAAAATTTCTTTGTGGGGGTTTCACAATTGGAATGGGTGTGTTACATGCTGTTTGTGATGGATTTGGTGCATCACAATTCTTCAACACAATTGTTGAACTTGCAAGAGGAAGAATTGAGCCATCAGTGAAACCTGTATGGGAAAGAGAGAGACTAGTTGGATCAATAACTAAACAACCATTTCCACTATTCCCCATGAACAAAGAATCTATAGCATTTTCACCTTTTTTGAATCAAACCAATAGTACTAGTATTAAGCAATATTGTTTTAAAGTGGAGAGTGAAATGATAACAAAACTTAAGTTAAGTTTAATGAAGGAAAGTGAAAATATAAGGGTCACAACATTTGAATCACTTGCAGCTTATATTTGGAGATCAAGAGCAAGAGCCTTAAAACTTAACAACAATGGAGATACAATGTTGACTGTGTTAGTTGGTATGAGAAGAAATTTGAAAGGTTATGATCCAATACCAAAAGGGTTTTATGGTAATTCTGTTATGGAAGCAAACATTGTGTTAAAAGTGAATGATCTAAATGAAATGTCACTCTATGAAATTGTTAAGTTGATCAAAGAGGCTAAAAATGTTGCTTCAAGTGCCGATTATGTCAAAAACACAATCGACTCTTTGGAGACGAATTTTAAGGATCGTGTTAACATGGTAAAAAGTACCGGTGCGGTAACGGTTTTGACTGAGTGGAAGCATTTGGGTTTTATGGGTGAAAATGTAGATTTTGGAGGGTATGAAATAGTAAATTTAGTACCAGCACCATGCAACTTATTTGCATCTGTGGAAATGAGTGTTATCTCATCTTCTAATAAATTTGATGATGCTGATCCATCAATGAAAGGAGGAATTAATCTTTTTACATCACTTCCTGTTGCTGCCATGCCTAAGTTCAAGGAAGAAATTGAAGCTTTAAGATCTCTTAGTTGA 1356 0.3437 MKDVELVKPSKFTPSCILSLSTLDNRGIYNNHCQTVHVYRSSETRDFDSSFNLCHVFKEALSKALFYYYPFAGRLMKHADDGKLRVNCNPDAENYGVPFLEAIANCTLSSINYLDNTDTEIAKHLVLNPQDLSYPLVFKVTKFLCGGFTIGMGVLHAVCDGFGASQFFNTIVELARGRIEPSVKPVWERERLVGSITKQPFPLFPMNKESIAFSPFLNQTNSTSIKQYCFKVESEMITKLKLSLMKESENIRVTTFESLAAYIWRSRARALKLNNNGDTMLTVLVGMRRNLKGYDPIPKGFYGNSVMEANIVLKVNDLNEMSLYEIVKLIKEAKNVASSADYVKNTIDSLETNFKDRVNMVKSTGAVTVLTEWKHLGFMGENVDFGGYEIVNLVPAPCNLFASVEMSVISSSNKFDDADPSMKGGINLFTSLPVAAMPKFKEEIEALRSLS 451
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre6g00809 451 PANTHER ACYL TRANSFERASE 4 3 445 - -
Trre6g00809 451 Gene3D - 1 202 IPR023213 -
Trre6g00809 451 Pfam Transferase family 4 446 - -
Trre6g00809 451 Gene3D - 217 444 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre6g00809 Trre-Chr6 6206356 6208592 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre6g00809 1 386 Monolignol Biosynthesis Gene Families AT5G48930 28.429 6.61e-34 130
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre6g00809 K20240 - gmx:100801843 419.083