Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre6g00806 ATGAAAGATGTTGTGCTTGTAAAACCATCAAAATCCACTCCTTCTTGTATTCTTTCTCTTTCTACACTTGACAATAAAATCTCCAATAATAACATTTGCCAATTTGTTCATGTGTATCGATCGTCAACAATTCATGATTCAGATTCTAGTTTCAATCCTTGTGACGATTTCAAAGAGGCACTTTCAAAGGCTTTATTTTATTATTATCCTCTCGCAGGTAGACTAGTGACACATGTTGATGGTAAACTTAGAGTTGAGATCAATGCCAACAATGCAGAATTTGGTGTTCCAGTCTTGGAAGCCATTGCTAACTGCACTCTTTCTTCTCTTCATTACTTGGACGGCAATGACACTGAAATGGCTAGTCAGTTGGTGCTTGATTTTCCTTCTCCTCAAGATAAAACCTACCCTTTGGTTTTCATGGTAACAAAATTTCTTTGTGGAGGTTTCACAATTGGAATGGGACTCTCACATGCACTTTGTGATGGATTTGGTGTATCTCAATTCTTCAAATCAATTGTTGAACTTGCAAGTGGAAAAACCGAGCCATCGGTGAAACCTGTGTGGGAAAGAGAGAAACTAGTTGGATCAATAACTAAACAACCAATTCCACCATGTCCCATAGACAGAGACTCTGCTGCATTTTCACCTTTTCTGAATCAAACCAATAGTACAACAGATATTAAGCAATTTTGTTTTAAAGTGGAGGGTGAAATAATAACAAGGCTTAAGTTAAGTTTAATGAAGGAACGTGAAGAAATAAAGTTCACAACTTTTGAATCACTTGCAGGTTATGTATGGAGGTCAAGAGCAAGAGCCTTAAAACTTAGCAACAATGGAAAAACAATGTTGAAAATTTTAGTTGGTATTAGGCGCTACATGAAGGGTTATGATCCATTGCCTGAAGGGTATTATGGTAATTCTATTATGGATGGAAAACTTGTGTTACAAGTTAGTGAGCTTAATGAAAAACCACTCTATGAAATTGCTAAGTTGATTAAAGAGACTATTAATGTTGTTTCCACTACTGATTATGTCACGAATTCGATCGACACTTGGGAGACGATTAATCAAGAAGATGAAATTGGCATGGAATTGGAAGCAAGTGGTGCAGTAACAGTTCTAACAGAGTGGAAGCATTTAGGTTTCATGGAAAATGTAGATTTTGGAAAGAATGAAATAGTGAATTTTGTACCAGCACCTTGTAAGATGCTTGGAACTGTGGATGTTTGCATTTTCATGCATCCTAATAAATTTGATGATAATGATCCATTAATGAAAGGAGGTGTTAAGATTTTCACATCACTCCCTGTTGATGCAATGCCCAAGTTTAAGGAGGAAATTGAAGCTTTAAAGGTTCTTTATTGA 1368 0.3618 MKDVVLVKPSKSTPSCILSLSTLDNKISNNNICQFVHVYRSSTIHDSDSSFNPCDDFKEALSKALFYYYPLAGRLVTHVDGKLRVEINANNAEFGVPVLEAIANCTLSSLHYLDGNDTEMASQLVLDFPSPQDKTYPLVFMVTKFLCGGFTIGMGLSHALCDGFGVSQFFKSIVELASGKTEPSVKPVWEREKLVGSITKQPIPPCPIDRDSAAFSPFLNQTNSTTDIKQFCFKVEGEIITRLKLSLMKEREEIKFTTFESLAGYVWRSRARALKLSNNGKTMLKILVGIRRYMKGYDPLPEGYYGNSIMDGKLVLQVSELNEKPLYEIAKLIKETINVVSTTDYVTNSIDTWETINQEDEIGMELEASGAVTVLTEWKHLGFMENVDFGKNEIVNFVPAPCKMLGTVDVCIFMHPNKFDDNDPLMKGGVKIFTSLPVDAMPKFKEEIEALKVLY 455
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre6g00806 455 Gene3D - 217 448 IPR023213 -
Trre6g00806 455 Pfam Transferase family 6 450 - -
Trre6g00806 455 PANTHER ACYL TRANSFERASE 4 3 449 - -
Trre6g00806 455 Gene3D - 1 203 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre6g00806 Trre-Chr6 6177768 6180023 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre6g00806 1 400 Monolignol Biosynthesis Gene Families AT5G48930 28.777 1.09e-29 118
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre6g00806 K20240 - gmx:100801843 459.144