Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre6g00805 ATGGCTTATCAAAAAGCTACACTAGACCTTAAAATGAAAGATGTTGTGCTTGTAAAACCATCAAAATCCACTCCTTCTTGTATTCTTTCTCTTTCTACACTTGACAATAAAATCTCCAATAATAACATTTGCCAATTTGTTCATGTGTATCGATCGTCAACAATTCATGATTCAGATTCTAGTTTCAATCCTTGTGACGATTTCAAAGAGGCACTTTCAAAGGCTTTATTTTATTATTATCCTCTCGCAGGTAGACTAGTGACACATGTTGATGGTAAACTTAGAGTTGAGATCAATGCCAACAATGCAGAATTTGGTGTTCCAGTCTTGGAAGCCATTGCTAACTGCACTCTTTCTTCTCTTCATTACTTGGACGGCAATGACACTGAAATGGCTAGTCAGTTGGTGCTTGATTTTCCTTCTCCTCAAGATAAAACCTACCCTTTGGTTTTCATGGTAACAAAATTTCTTTGTGGAGGTTTCACAATTGGAATGGGACTCTCACATGCACTTTGTGATGGATTTGGTGTATCTCAATTCTTCAAATCAATTGTTGAACTTGCAAGTGGAAAAACCGAGCCATCGGTGAAACCTGTGTGGGAAAGAGAGAAACTAGTTGGATCAATAACTAAACAACCAATTCCACCATGTCCCATAGACAGAGACTCTGCTGCATTTTCACCTTTTCTGAATCAAACCAATAGTACAACAGATATTAAGCAATTTTGTTTTAAAGTGGAGGGTGAAATAATAACAAGGCTTAAGTTAAGTTTAATGAAGGAACGTGAAGAAATAAAGTTCACAACTTTTGAATCACTTGCAGGTTATGTATGGAGGTCAAGAGCAAGAGCCTTAAAACTTAGCAACAATGGAAAAACAATGTTGAAAATTTTAGTTGGTATTAGGCGCTACATGAAGGGTTATGATCCATTGCCTGAAGGGTATTATGGTAATTCTATTATGGATGGAAAACTTGTGTTACAAGTTAGTGAGCTTAATGAAAAACCACTCTATGAAATTGCTAAGTTGATTAAAGAGACTATTAATGTTGTTTCCACTACTGATTATGTCACGAATTCGATCGACACTTGGGAGACGATTAATCAAGAAGATGAAATTGGCATGGAATTGGAAGCAAGTGGTGCAGTAACAGTTCTAACAGAGTGGAAGCATTTAGGTTTCATGGAAAATGTAGATTTTGGAAAGAATGAAATAGTGAATTTTGTACCAGCACCTTGTAAGATGCTTGGAACTGTGGATGTTTGCATTTTCATGCATCCTAATAAATTTGATGATAATGATCCATTAATGAAAGGAGGTGTTAAGATTTTCACATCACTCCCTGTTGATGCAATGCCCAAGTTTAAGGAGGAAATTGAAGCTTTAAAGGTTCTTTATTGA 1401 0.3612 MAYQKATLDLKMKDVVLVKPSKSTPSCILSLSTLDNKISNNNICQFVHVYRSSTIHDSDSSFNPCDDFKEALSKALFYYYPLAGRLVTHVDGKLRVEINANNAEFGVPVLEAIANCTLSSLHYLDGNDTEMASQLVLDFPSPQDKTYPLVFMVTKFLCGGFTIGMGLSHALCDGFGVSQFFKSIVELASGKTEPSVKPVWEREKLVGSITKQPIPPCPIDRDSAAFSPFLNQTNSTTDIKQFCFKVEGEIITRLKLSLMKEREEIKFTTFESLAGYVWRSRARALKLSNNGKTMLKILVGIRRYMKGYDPLPEGYYGNSIMDGKLVLQVSELNEKPLYEIAKLIKETINVVSTTDYVTNSIDTWETINQEDEIGMELEASGAVTVLTEWKHLGFMENVDFGKNEIVNFVPAPCKMLGTVDVCIFMHPNKFDDNDPLMKGGVKIFTSLPVDAMPKFKEEIEALKVLY 466
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre6g00805 466 PANTHER ACYL TRANSFERASE 4 10 460 - -
Trre6g00805 466 Gene3D - 228 459 IPR023213 -
Trre6g00805 466 Gene3D - 5 214 IPR023213 -
Trre6g00805 466 Pfam Transferase family 16 461 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre6g00805 Trre-Chr6 6177735 6180023 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre6g00805 8 411 Monolignol Biosynthesis Gene Families AT5G48930 28.504 4.63e-30 119
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre6g00805 K20240 - gmx:100801843 464.151