Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre6g00804 ATGAAGGAAAGTGAAAATATAAAGTTCACAACTTTTGAATCACTTGCAGGTTATGTGTGGAGGTCAAGAGCAAGAGCCTTAAAACTTAGTAACAATGGGAAAACAATGTTGAATATGTTAGTTGGTATTAGGCGCAACATGAAGGGTTATGATCCCTTGCCCGAAGGGTATTATGGAAATTCTATTGTGGATGGAAAACTTGTGTTAAAAGTTAGTGAGCTCAATGAAAGGCCACTCTATGAAATTGTTAAGTCGATCAAAGAGACTATTAATGTCGTTTCCAACGCTGATTACGTCACAAATTCGATCAACACTTGGGAGACAATTAATCAAGAAGAGGATATCAGCATGGAATTGGAAGCTAGTGGTGCAGTGACAGTTCTAACAGATTGGAAGCATTTAGGTTTTATGGAAAATGTAGATTTTGGAAAGAATGAAGTAGTGAATTTTCATGCATCCTAA 462 0.3658 MKESENIKFTTFESLAGYVWRSRARALKLSNNGKTMLNMLVGIRRNMKGYDPLPEGYYGNSIVDGKLVLKVSELNERPLYEIVKSIKETINVVSNADYVTNSINTWETINQEEDISMELEASGAVTVLTDWKHLGFMENVDFGKNEVVNFHAS 153
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre6g00804 153 PANTHER ACYL TRANSFERASE 4 6 150 - -
Trre6g00804 153 Pfam Transferase family 3 148 - -
Trre6g00804 153 Gene3D - 1 152 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre6g00804 Trre-Chr6 6175166 6175627 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre6g00804 2 143 Monolignol Biosynthesis Gene Families AT5G48930 25.850 2.87e-08 49.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre6g00804 K20240 - gmx:100801843 144.05