Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre6g00803 ATGGCACCCCTAAAACTTGAAATGAAAGATGTTGAGCTTGTAAAACCATCAAAGCTCACTCCTTCTTGTATTCTTTCTCTCTCTACAATTGACAATAAAGATGGCTATAATAACTTTGGTCAAACTGTTCATGTATACCGATCATCAACAACTCATGATTCTAATTCTAGTGTCAACCCTTGTCATGTATTCAAAGAAGCACTCTCAAAGGCTTTGTTTTATTATTATCCCCTTGCAGGTAGACTAGTGAAACATGCTGATGATGGAAAACTTAGAGTCAAGTGCAATCCTGATGAAGAAAATTATGGTGTTCCATTCTTGGAAGCAATTGCTAATTGCACCCTTTCTTCTATTCATTACTTGAACACTACTGACACAGAAATTGCAAAACATTTGGTGTTTGATCCTCAAGATAAAAGTTACCCTTTAGTGATCATGGTGACAAAATTTCTTTGTGGTGGCTTCACAATCGGAATCGGAATGTCACATGCGGTTTGTGATGGATTTGGTTCATCTCAATTCTTTAAGTCAATTATTGAACTTGCAAGAGGAAGAACTGAACCTTCAGTGAAACCTGTGTGGGAAAGAGAAAGACTAGTTGGATCAATATCTAAACAACCTTTTTCACTTTGCCCTATGATCAATATAGAATCTGCTGCATTTTCACCTTTTCTTAATCAAACTAGTAGTACAATTATTAAGCAATATTGTTTTAACGTCGAGGGCGAAATGATAACAAGGCTTAAGTCGAGTTTGATGAAGGAAAGTGAAAATATAAGGTTCACAACATTTGAATCACTTGCAGGTTATGTTTGGAGATCAAGAGCAAGAGCTTTAAAACTTAGCAACAATGGAGAAACAATGTTAACTGTGGTAGTTGGTATGAGAAGAAATTTGAAGGATGATATTGATGATGCTTTACCTAAAGGGTATTATGGGAATGCTGTTATGGATGGAAACATTGTGTTGAAAGTGAGTGATCTCGATGAAAAGCCGCTCTATGAAATTGTTAAGATGATTAAAGAAACTAAAAACATTGTTTCCGACACTGATTATGTCAAAAACTCAATCAACATGTTGGAGACGAATTTTAAGGAGGGTTTCGACAAGGAAGCTAGTGTTGCGGTAACAATTCTGACTGAGTGGAAGCATTTGAGTTTTCTTGGTGAAAATGCTGATTTTGGAGGCAATGAAGCAGTGAATTTAGTACCAGCACCATGCAACATGTTTGGCGCCGTGGATGCGTGCATTTTCGCATCTCCTAATAAATTTGACGATGTTGATTCATCCATGAAAGGTGGTGTTAAGATTTTCACATCACTCCCTGTTGATGCAATGCCCAAATTTAAGGAGGAAATTGAAGCTTTAAGGTTTCTCATTTGA 1383 0.3666 MAPLKLEMKDVELVKPSKLTPSCILSLSTIDNKDGYNNFGQTVHVYRSSTTHDSNSSVNPCHVFKEALSKALFYYYPLAGRLVKHADDGKLRVKCNPDEENYGVPFLEAIANCTLSSIHYLNTTDTEIAKHLVFDPQDKSYPLVIMVTKFLCGGFTIGIGMSHAVCDGFGSSQFFKSIIELARGRTEPSVKPVWERERLVGSISKQPFSLCPMINIESAAFSPFLNQTSSTIIKQYCFNVEGEMITRLKSSLMKESENIRFTTFESLAGYVWRSRARALKLSNNGETMLTVVVGMRRNLKDDIDDALPKGYYGNAVMDGNIVLKVSDLDEKPLYEIVKMIKETKNIVSDTDYVKNSINMLETNFKEGFDKEASVAVTILTEWKHLSFLGENADFGGNEAVNLVPAPCNMFGAVDACIFASPNKFDDVDSSMKGGVKIFTSLPVDAMPKFKEEIEALRFLI 460
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre6g00803 460 Gene3D - 2 209 IPR023213 -
Trre6g00803 460 PANTHER ACYL TRANSFERASE 4 5 454 - -
Trre6g00803 460 Pfam Transferase family 5 455 - -
Trre6g00803 460 Gene3D - 226 453 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre6g00803 Trre-Chr6 6169296 6171185 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre6g00803 4 405 Monolignol Biosynthesis Gene Families AT5G48930 28.000 4.53e-35 133
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre6g00803 K20240 - gmx:100801843 449.514