Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre6g00802 ATGAAAGATGTTGTGCTTGTAAAACCATCAAAATCCACTCCTTCTTGTATACTTTCTCTCTCAACAATTGACAATAAAGCCTATAATGATGAAATATGCCAAACCATTCATGTTTACCGATCATCATCTCATAATTCTCCTAGCAAAAGTTTCAACCCTTGTCTTTTGATAAAACAAGCACTCGCAAAGTCTTTGTTTTATTATTATCCTCTTGCAGGTAGACTGGTGAAACATGCTCATGATGGAAAACTTAGAGTCATGTGCAATCCTAATGAAGAAAACTCTGGTGTTCCATTCTTGGAAGCAAATGCTAAATGCACCCTCTCTTCTCTTCATTACTTGGACAATACCGACACTGATATTACGAAACATTTGATGCTTGATCTTCCTTCTCCTCGCGATAAAACTTACCCTTTGGTATTAATGGTGACAAAATTTCTTTGTGGAGGTTTCACAATTGGAATGGGAGTGTCACATGCACTTTGTGATGGATTTGGTGGATCTCAATTCTTCAAATCAATTGTTGAACTTGCAAGTGGAAGAATCGAGCCATCGGTGAAACCAGTATGGGAAAGAGAGAGACTAATTGGTTCAATAACTAAACAACCATTTCGATCCCTCATCGATAAAGATTCAGCTGCATTTTCGCCTTTTCTTCAACCGAAAACAGTTATTAAACAATACTGTTTTAAGATTGAAAGTGATGTGATAAAAAGACTCAAGATGAGTTTGATGAAAGAAAGTGAAAGTCATTTTAATATCACAACTTTTGAATCACTTGCTGCTTATGTGTGGAGATCAAAAGCAAGAGCATTAAAACTTAGTTCAAATGGAAAAACAGTGTTGATTATGGAAGTTGGTATGAGAGGAAAAAACTTAAAGGATTATGAATATACTCTTCCTGAAGGGTATTATGGGAATGCTATTGTGGATGCAGATCTTGTGTTAAAAGTTAATGAGCTTAATGAGAAACCACTCTATGAAATTGTTAAGCTTATTAAAGAGACTAAAAATGTTGCTTCCACTATCGACTATGTGAGAAAATCGATCGATACTTTGGAAACGATAAAACAGGAGGAAGAGGACGAGGACGAAGATTTGAACATTGATGATGCAATAATGTATGTGACAGATTGGAAGAATTTAGGTTTCATGGAAAGTGTAGATTTTGAAGGGTATGAATTAGTGAATTTAGTGCCAGCACCATGCAACTTGTTTAAGTGTCTTGATACATGCATTTTCATGTCTCAGAATAAAATTGATGATCCATTAGAAGGAGGAGTTAGGATTTTTATATCGCTTCCTGTTGTTGCCATGCCTAAGTTTAAGGAAGAAATTGATGCTCTCAGATTTCTTTGA 1359 0.3547 MKDVVLVKPSKSTPSCILSLSTIDNKAYNDEICQTIHVYRSSSHNSPSKSFNPCLLIKQALAKSLFYYYPLAGRLVKHAHDGKLRVMCNPNEENSGVPFLEANAKCTLSSLHYLDNTDTDITKHLMLDLPSPRDKTYPLVLMVTKFLCGGFTIGMGVSHALCDGFGGSQFFKSIVELASGRIEPSVKPVWERERLIGSITKQPFRSLIDKDSAAFSPFLQPKTVIKQYCFKIESDVIKRLKMSLMKESESHFNITTFESLAAYVWRSKARALKLSSNGKTVLIMEVGMRGKNLKDYEYTLPEGYYGNAIVDADLVLKVNELNEKPLYEIVKLIKETKNVASTIDYVRKSIDTLETIKQEEEDEDEDLNIDDAIMYVTDWKNLGFMESVDFEGYELVNLVPAPCNLFKCLDTCIFMSQNKIDDPLEGGVRIFISLPVVAMPKFKEEIDALRFL 452
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre6g00802 452 Gene3D - 219 446 IPR023213 -
Trre6g00802 452 Pfam Transferase family 6 447 - -
Trre6g00802 452 Coils Coil 350 370 - -
Trre6g00802 452 Gene3D - 1 205 IPR023213 -
Trre6g00802 452 PANTHER ACYL TRANSFERASE 4 3 447 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre6g00802 Trre-Chr6 6166471 6167951 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre6g00802 1 404 Monolignol Biosynthesis Gene Families AT5G48930 27.166 1.17e-28 115
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre6g00802 K20240 - gmx:100783730 438.728