Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre6g00801 ATGGCTTATCAAAGAGCCCTCTTAAAACTTGAAATGAAAGATGTTGTGCTTGTAAAACCATCAAAATCCACTCCTTCTTGTATACTTTCTCTCTCAACAATTGACAATAAAGCCTATAATGATGAAATATGCCAAACCATTCATGTTTACCGATCATCATCTCATAATTCTCCTAGCAAAAGTTTCAACCCTTGTCTTTTGATAAAACAAGCACTCGCAAAGTCTTTGTTTTATTATTATCCTCTTGCAGGTAGACTGGTGAAACATGCTCATGATGGAAAACTTAGAGTCATGTGCAATCCTAATGAAGAAAACTCTGGTGTTCCATTCTTGGAAGCAAATGCTAAATGCACCCTCTCTTCTCTTCATTACTTGGACAATACCGACACTGATATTACGAAACATTTGATGCTTGATCTTCCTTCTCCTCGCGATAAAACTTACCCTTTGGTATTAATGGTGACAAAATTTCTTTGTGGAGGTTTCACAATTGGAATGGGAGTGTCACATGCACTTTGTGATGGATTTGGTGGATCTCAATTCTTCAAATCAATTGTTGAACTTGCAAGTGGAAGAATCGAGCCATCGGTGAAACCAGTATGGGAAAGAGAGAGACTAATTGGTTCAATAACTAAACAACCATTTCGATCCCTCATCGATAAAGATTCAGCTGCATTTTCGCCTTTTCTTCAACCGAAAACAGTTATTAAACAATACTGTTTTAAGATTGAAAGTGATGTGATAAAAAGACTCAAGATGAGTTTGATGAAAGAAAGTGAAAGTCATTTTAATATCACAACTTTTGAATCACTTGCTGCTTATGTGTGGAGATCAAAAGCAAGAGCATTAAAACTTAGTTCAAATGGAAAAACAGTGTTGATTATGGAAGTTGGTATGAGAGGAAAAAACTTAAAGGATTATGAATATACTCTTCCTGAAGGGTATTATGGGAATGCTATTGTGGATGCAGATCTTGTGTTAAAAGTTAATGAGCTTAATGAGAAACCACTCTATGAAATTGTTAAGCTTATTAAAGAGACTAAAAATGTTGCTTCCACTATCGACTATGTGAGAAAATCGATCGATACTTTGGAAACGATAAAACAGGAGGAAGAGGACGAGGACGAAGATTTGAACATTGATGATGCAATAATGTATGTGACAGATTGGAAGAATTTAGGTTTCATGGAAAGTGTAGATTTTGAAGGGTATGAATTAGTGAATTTAGTGCCAGCACCATGCAACTTGTTTAAGTGTCTTGATACATGCATTTTCATGTCTCAGAATAAAATTGATGATCCATTAGAAGGAGGAGTTAGGATTTTTATATCGCTTCCTGTTGTTGCCATGCCTAAGTTTAAGGAAGAAATTGATGCTCTCAGATTTCTTTGA 1392 0.3549 MAYQRALLKLEMKDVVLVKPSKSTPSCILSLSTIDNKAYNDEICQTIHVYRSSSHNSPSKSFNPCLLIKQALAKSLFYYYPLAGRLVKHAHDGKLRVMCNPNEENSGVPFLEANAKCTLSSLHYLDNTDTDITKHLMLDLPSPRDKTYPLVLMVTKFLCGGFTIGMGVSHALCDGFGGSQFFKSIVELASGRIEPSVKPVWERERLIGSITKQPFRSLIDKDSAAFSPFLQPKTVIKQYCFKIESDVIKRLKMSLMKESESHFNITTFESLAAYVWRSKARALKLSSNGKTVLIMEVGMRGKNLKDYEYTLPEGYYGNAIVDADLVLKVNELNEKPLYEIVKLIKETKNVASTIDYVRKSIDTLETIKQEEEDEDEDLNIDDAIMYVTDWKNLGFMESVDFEGYELVNLVPAPCNLFKCLDTCIFMSQNKIDDPLEGGVRIFISLPVVAMPKFKEEIDALRFL 463
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre6g00801 463 Pfam Transferase family 9 458 - -
Trre6g00801 463 PANTHER ACYL TRANSFERASE 4 9 458 - -
Trre6g00801 463 Coils Coil 361 381 - -
Trre6g00801 463 Gene3D - 230 457 IPR023213 -
Trre6g00801 463 Gene3D - 6 216 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre6g00801 Trre-Chr6 6166438 6167951 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre6g00801 8 415 Monolignol Biosynthesis Gene Families AT5G48930 27.146 9.15e-30 119
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre6g00801 K20240 - gmx:100783730 449.899