Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre6g00799 ATGCCTTCAACTCTTCAATGGCTAAGCCTAGTTGGTATCATTTGGCTCCAAGCCATAAATGGAACAAACTCAAATTTCCCTGCTTACTCTTCCCAACTAAAACAGCTTCTTTCCATTTCGCAAATTCAGCTCAATAACCTTGCTTTTGCATCTGATGCCGGCAAACTTTTTGGTTGGTTTTCCGGCCTTGCAACTATTTACCTTCCCCTCTGGCTCGTCCTCACCATCGGTTCGTTTCTCGGACTAATCGGTTATGGTGTGCAATATCTTTTCATAACCAACCAAATTTCTTCTCTATCATACTGGCATGTGTTCCTACTAACTTTTCTTGCCGGGAATAGCATTTGTTGGATCAACACTGTCTGTTATGTCGTTGCCATACGAAACTTTCTATCCGATCGCCAAGTTGCCGTTGGATTAACAACTAGTTATCAAGGATTAAGTGCAAAGATTTATACCAATATTGTTGATGTTGTTTCTTCACACAATAAGGCTAAAACTTTTCTTTTCTTGAACTCTTTTGTACCTGTTGTAGTTGGATTTATAGTAGCTCCTCTAGTAAGAGAAATTGAAGTGAAAAATCCTAAGCATTCTAGTGTTGGTTTTGCTTTGATGTTTGTTATTACAATTGCAACTGGTATATATGCTGTAATAAGTAGTTTGCAAATTTTCACAAACAAAATATCCTCACTTGGTGTCCTTATTGGTATTTTAGTATCACTTTTGTTACCTCTATTGCTTCCGATTTCTGTGAAGATCAAGGAACTATTTGAATCATGGCATAAAAAAAGAGAAAGATTAAGAATATACCATTTTACCATGGAAGAGAATACTACATATGAAGAGAGAATAGAGAATGAAGTGAAAGAGGGTGGAGATAGTTGTGAATTACAAGAGGTTGGTGTAATGGAAGAAATTGGAGTGAAGTTAATGTTGAGAAGAATCAATTTCTGGTTATATTTCTTTGTCTATTTTTTTGGTGCAACAATTGGTTTAGTATTTCTTAACAATTTGGGACAAATAGCTGAATCTAGAGGTTGCTCTGCTACTTCATCTTTGGTGTCTTTGTCGTCTTCTTTTGGATTCTTCGGCCGTCTCATTCCATCTCTTATGGACTATTTCTACAGGGGAAAATATACAATTTCAAGACCTACATTTATGGTATCAGTTATGACACCAACAGCAGGTGCATTCTTCTTACTTCTCAACAAAACTGATCTTTCTCTTTACATAAGCACAGCTGTGATTGGAGTTTCTACTGGAGCAATCACTTCAACAGCTATTTCCACAACAACTGAGCTATTTGGTACAAAGAATTTCTCTGTAAATCATAATGTGGTTGTGGCAAATATTCCAATGGGATCCTTATTGTTTGGTTACTCAGCTGCATTTATTTACCATAAAGAAGGAAATGAACATGGAAAATGCATGGGTATGGAATGTTATAGTAACACTTTTATCATTTGGGGTTCCTTTTGTTGCCTTGGAACTTTATTAGCTTTGATTCTACATTTTAGAACTCGTAAGTTTTACTCACAAAAACAATAG 1548 0.3605 MPSTLQWLSLVGIIWLQAINGTNSNFPAYSSQLKQLLSISQIQLNNLAFASDAGKLFGWFSGLATIYLPLWLVLTIGSFLGLIGYGVQYLFITNQISSLSYWHVFLLTFLAGNSICWINTVCYVVAIRNFLSDRQVAVGLTTSYQGLSAKIYTNIVDVVSSHNKAKTFLFLNSFVPVVVGFIVAPLVREIEVKNPKHSSVGFALMFVITIATGIYAVISSLQIFTNKISSLGVLIGILVSLLLPLLLPISVKIKELFESWHKKRERLRIYHFTMEENTTYEERIENEVKEGGDSCELQEVGVMEEIGVKLMLRRINFWLYFFVYFFGATIGLVFLNNLGQIAESRGCSATSSLVSLSSSFGFFGRLIPSLMDYFYRGKYTISRPTFMVSVMTPTAGAFFLLLNKTDLSLYISTAVIGVSTGAITSTAISTTTELFGTKNFSVNHNVVVANIPMGSLLFGYSAAFIYHKEGNEHGKCMGMECYSNTFIIWGSFCCLGTLLALILHFRTRKFYSQKQ 515
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre6g00799 515 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 7 512 - -
Trre6g00799 515 Pfam Nodulin-like 6 249 IPR010658 -
Trre6g00799 515 SUPERFAMILY MFS general substrate transporter 210 509 IPR036259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre6g00799 Trre-Chr6 6150656 6152692 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre6g00799 5 514 Nodulin-like Gene Family AT2G30300 48.752 6.34e-154 447
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre6g00799 - - gmx:100800763 756.518