Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre6g00795 ATGGTTTCCAAAGTTCACAAGAGAACAGCCTTGTACAGGAGGAAACTACAACTACTACGTTCAATCACTTACCCTTCGCACAATAAAGCCTCGGTGATATTAGATGCAATCGAGTATATACAAGGATTAAAGCAAAAACTTGAAGAATTGAAACAGTTACCCGTTCCAACAACGCAATCGATTATTGATTATAATCCAATGCCTAAGCTTAAAGTTGAGACACAAGAAGAAGGCTTTGTGATCAAGGTTGTGAGTGAAAGGAGTTGCCAGGGATTGCTAGTGTTCATCTTGGAAGCTTTTGAAGAACTTGGTCTTGAAGTACTCCATGCTAGGGTTTCTTGTGTTGATGACTTTTGTTTAGAAGCTGTTGGGAACAAAGAGAACAATGAAGATACTAGTCCTTTGAGTGTACAATTAGTTGAAGAAGTAGTGTCTCAAGCTATTCAAAACTGGAGGGAAGTTACAAAACATTAA 474 0.3819 MVSKVHKRTALYRRKLQLLRSITYPSHNKASVILDAIEYIQGLKQKLEELKQLPVPTTQSIIDYNPMPKLKVETQEEGFVIKVVSERSCQGLLVFILEAFEELGLEVLHARVSCVDDFCLEAVGNKENNEDTSPLSVQLVEEVVSQAIQNWREVTKH 157
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre6g00795 157 PANTHER TRANSCRIPTION FACTOR SCREAM2-RELATED 12 149 - -
Trre6g00795 157 Coils Coil 33 53 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre6g00795 Trre-Chr6 6135907 6137323 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre6g00795 1 121 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G26744 26.282 5.13e-06 43.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre6g00795 - - gmx:100305696 202.216