Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre6g00788 ATGTCCTTTGCTCAACTATCTTCAGATTTCTATGGAACAACATGCCCCAAAGCCTTATCTATCATAAATTCTGCAGTGTGTAGCGCCGTTTCGAAAGAGCATCGCATGGGCGCTTCCTTGCTCCGTCTTCATTTTCATGATTGCTTTGTTAATGGATGTGATGCATCAGTCCTCCTAGATGACACTTCAAGCTTCACAGGAGAGAAATCAGCCGGCGCAAATGTGAATTCTCTACGAGGATTCGATGTGATTGACAACATTAAAACTCAATTGGAGACTGCTTGTCCTGGAATTGTTTCTTGTGCAGATATTGTTGCTGCTGCTGCTCGCGATGCTGTTGTAGCATTGGGTGGTCCATCATGGAGTGTTGGGTTAGGCAGAAGAGATTCAACAACTGCTAGTAAAGATACTGCCACTAGTGATATTCCATCCCCTCTAATGGATCTTAGTGACCTCATTTCTGCTTTTTCAAATAAGGGATTTACCTCCAAAGAGATGGTAGTCCTTTCAGGAGCTCATACAACAGGACAAGCCAGGTGTCAGTTGTTTAGAGGCCGAATCTATAATGAAACAACCATTGATTCAAATTTTGCAACCTCAGTGAAATCAAACTGTCCAAGCACTGGTGGTGATAGTAACTTAACCTCACTTGATGTCACAACCAATGTGTTATTTGACAATGCTTATTTCAAGAATCTAGTTAACAAAAAAGGACTTCTACATTCTGATCAACAACTCTTTAGTGGCGGTTCTACTGATTCTCAAGTTACTACCTATAGCACTAGCCCTTCAACTTTCTTTGCAGATTTTGCTAGTGCTATGGTGAAAATGGGAAACCTCAGCCCTTTAACAGGGAACAATGGCCAGATTCGTACTAATTGTCGCAAAATTAACTAA 897 0.4136 MSFAQLSSDFYGTTCPKALSIINSAVCSAVSKEHRMGASLLRLHFHDCFVNGCDASVLLDDTSSFTGEKSAGANVNSLRGFDVIDNIKTQLETACPGIVSCADIVAAAARDAVVALGGPSWSVGLGRRDSTTASKDTATSDIPSPLMDLSDLISAFSNKGFTSKEMVVLSGAHTTGQARCQLFRGRIYNETTIDSNFATSVKSNCPSTGGDSNLTSLDVTTNVLFDNAYFKNLVNKKGLLHSDQQLFSGGSTDSQVTTYSTSPSTFFADFASAMVKMGNLSPLTGNNGQIRTNCRKIN 298
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre6g00788 298 SUPERFAMILY Heme-dependent peroxidases 5 298 IPR010255 GO:0004601|GO:0006979|GO:0020037
Trre6g00788 298 PRINTS Plant peroxidase signature 272 285 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre6g00788 298 PRINTS Plant peroxidase signature 39 59 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre6g00788 298 PRINTS Plant peroxidase signature 164 176 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre6g00788 298 PRINTS Plant peroxidase signature 79 92 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre6g00788 298 PRINTS Plant peroxidase signature 98 108 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre6g00788 298 PRINTS Plant peroxidase signature 216 231 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre6g00788 298 PRINTS Plant peroxidase signature 15 34 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre6g00788 298 PRINTS Plant peroxidase signature 232 249 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre6g00788 298 PRINTS Plant peroxidase signature 117 132 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre6g00788 298 ProSiteProfiles Plant heme peroxidase family profile. 5 298 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trre6g00788 298 CDD secretory_peroxidase 5 297 IPR033905 GO:0004601|GO:0042744
Trre6g00788 298 Gene3D - 9 295 - -
Trre6g00788 298 PANTHER PEROXIDASE 72-RELATED 4 296 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre6g00788 298 FunFam Peroxidase 143 277 - -
Trre6g00788 298 PRINTS Haem peroxidase superfamily signature 99 116 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trre6g00788 298 PRINTS Haem peroxidase superfamily signature 218 233 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trre6g00788 298 PRINTS Haem peroxidase superfamily signature 37 51 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trre6g00788 298 PRINTS Haem peroxidase superfamily signature 117 129 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trre6g00788 298 PRINTS Haem peroxidase superfamily signature 165 180 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trre6g00788 298 Pfam Peroxidase 25 261 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trre6g00788 298 Gene3D Peroxidase, domain 2 143 277 - -
Trre6g00788 298 ProSitePatterns Peroxidases active site signature. 37 48 IPR019794 GO:0004601
Trre6g00788 298 FunFam Peroxidase 9 147 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre6g00788 Trre-Chr6 6088475 6090527 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre6g00788 4 298 Peroxidase AT5G05340 62.626 1.91e-136 387
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre6g00788 K00430 - gmx:100818176 500.745