Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre6g00787 ATGGCTTTCTCTCACTCACATTGTAACATTTTTTGCATCTCTATTTTGTTTTCTTTGTTGGCCATGTCCTTTGCTCAACTATCTTCAGATTTCTATGGAACAACATGCCCCAAAGCCTTATCTATCATAAATTCTGCAGTGTGTAGCGCCGTTTCGAAAGAGCATCGCATGGGCGCTTCCTTGCTCCGTCTTCATTTTCATGATTGCTTTGTTAATGGATGTGATGCATCAGTCCTCCTAGATGACACTTCAAGCTTCACAGGAGAGAAATCAGCCGGCGCAAATGTGAATTCTCTACGAGGATTCGATGTGATTGACAACATTAAAACTCAATTGGAGACTGCTTGTCCTGGAATTGTTTCTTGTGCAGATATTGTTGCTGCTGCTGCTCGCGATGCTGTTGTAGCATTGGGTGGTCCATCATGGAGTGTTGGGTTAGGCAGAAGAGATTCAACAACTGCTAGTAAAGATACTGCCACTAGTGATATTCCATCCCCTCTAATGGATCTTAGTGACCTCATTTCTGCTTTTTCAAATAAGGGATTTACCTCCAAAGAGATGGTAGTCCTTTCAGGAGCTCATACAACAGGACAAGCCAGGTGTCAGTTGTTTAGAGGCCGAATCTATAATGAAACAACCATTGATTCAAATTTTGCAACCTCAGTGAAATCAAACTGTCCAAGCACTGGTGGTGATAGTAACTTAACCTCACTTGATGTCACAACCAATGTGTTATTTGACAATGCTTATTTCAAGAATCTAGTTAACAAAAAAGGACTTCTACATTCTGATCAACAACTCTTTAGTGGCGGTTCTACTGATTCTCAAGTTACTACCTATAGCACTAGCCCTTCAACTTTCTTTGCAGATTTTGCTAGTGCTATGGTGAAAATGGGAAACCTCAGCCCTTTAACAGGGAACAATGGCCAGATTCGTACTAATTGTCGCAAAATTAACTAA 960 0.4094 MAFSHSHCNIFCISILFSLLAMSFAQLSSDFYGTTCPKALSIINSAVCSAVSKEHRMGASLLRLHFHDCFVNGCDASVLLDDTSSFTGEKSAGANVNSLRGFDVIDNIKTQLETACPGIVSCADIVAAAARDAVVALGGPSWSVGLGRRDSTTASKDTATSDIPSPLMDLSDLISAFSNKGFTSKEMVVLSGAHTTGQARCQLFRGRIYNETTIDSNFATSVKSNCPSTGGDSNLTSLDVTTNVLFDNAYFKNLVNKKGLLHSDQQLFSGGSTDSQVTTYSTSPSTFFADFASAMVKMGNLSPLTGNNGQIRTNCRKIN 319
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre6g00787 319 FunFam Peroxidase 164 298 - -
Trre6g00787 319 Pfam Peroxidase 46 282 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trre6g00787 319 Gene3D - 30 316 - -
Trre6g00787 319 PRINTS Haem peroxidase superfamily signature 58 72 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trre6g00787 319 PRINTS Haem peroxidase superfamily signature 120 137 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trre6g00787 319 PRINTS Haem peroxidase superfamily signature 186 201 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trre6g00787 319 PRINTS Haem peroxidase superfamily signature 138 150 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trre6g00787 319 PRINTS Haem peroxidase superfamily signature 239 254 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trre6g00787 319 PANTHER PEROXIDASE 72-RELATED 22 317 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre6g00787 319 ProSiteProfiles Plant heme peroxidase family profile. 26 319 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trre6g00787 319 ProSitePatterns Peroxidases active site signature. 58 69 IPR019794 GO:0004601
Trre6g00787 319 Gene3D Peroxidase, domain 2 164 298 - -
Trre6g00787 319 CDD secretory_peroxidase 26 318 IPR033905 GO:0004601|GO:0042744
Trre6g00787 319 SUPERFAMILY Heme-dependent peroxidases 26 319 IPR010255 GO:0004601|GO:0006979|GO:0020037
Trre6g00787 319 PRINTS Plant peroxidase signature 36 55 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre6g00787 319 PRINTS Plant peroxidase signature 237 252 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre6g00787 319 PRINTS Plant peroxidase signature 138 153 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre6g00787 319 PRINTS Plant peroxidase signature 253 270 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre6g00787 319 PRINTS Plant peroxidase signature 185 197 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre6g00787 319 PRINTS Plant peroxidase signature 119 129 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre6g00787 319 PRINTS Plant peroxidase signature 60 80 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre6g00787 319 PRINTS Plant peroxidase signature 100 113 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre6g00787 319 PRINTS Plant peroxidase signature 293 306 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre6g00787 319 FunFam Peroxidase 30 168 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre6g00787 Trre-Chr6 6088475 6090590 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre6g00787 25 319 Peroxidase AT5G05340 62.626 3.86e-136 387
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre6g00787 K00430 - gmx:100818176 521.931