Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre6g00786 ATGGCACATTCTCCTAACTCTTATGTTACATTTGCTTTGGTCTTCCTTCTTATAGGGACCTCTTCAGCTCAACTTTCTGAGAATTTTTATTCTAAAAAATGTCCCAAAGTTTTTGACACGGTTAAATCTGTTGTTAAATCAGCTGTGGCCAAAGAACATCGCATCGGCGCATCTCTCCTTCGCCTCTTCTTCCACGACTGCTTTGTTGATGGTTGTGATGGATCAATACTACTTGATGACACTTCATCCTTCAGAGGAGAGAAAACTGCAGCTCCTAATAACAATTCAGTGAGGGGTTATGAAGTTATTGATGCTATAAAATCTAAGGTGGAAGCTATATGCCCCGGTGTGGTTTCATGTGCTGATATTGTGGCCATTACTGCTCGTGACTCTGTTGTCATTCTTGGAGGGCCATTTTGGAATGTAAAAGTTGGAAGAAGAGATTCAAGGACAGCTAATTTCAATGCAGCTAACACTGGTGTGATTCCACCTCCTACATCTAACCTAAATAACCTTATCTCAACTTTTAAAGCTCAAGGACTTTCTGCCAAGGACATGGTTGCTTTATCTGGAGCACACACAATAGGGAAATCAAGATGTACAAGTTTCAGAAACCACATATACAATGACAGCAACATTGACACTACATTTGCTAAGATAAGGCAAAAGAATTGTCCAAAGAAAAGTGGCTCAGGAGACAATAATCTAGCAAATCTAGATTTTAGAACTCCAACTTATTTTGACAATAATTACTACAAGAATCTCATTATCAAAAGAGGATTACTTCATTCTGATCAAGTACTTTTCAATGGTGGATCCACTGATTCATTTGTTAAAACTTATAGCCAAAATGATAAAGCCTTTGATGCTGATTTTGTTGCTGCAATGATTAGGATGGGAAATAATAAGCCTTTAACTGGGAAACAAGGAGAGATTAGGAAGAATTGCAGGAGATTGAATTAG 963 0.3801 MAHSPNSYVTFALVFLLIGTSSAQLSENFYSKKCPKVFDTVKSVVKSAVAKEHRIGASLLRLFFHDCFVDGCDGSILLDDTSSFRGEKTAAPNNNSVRGYEVIDAIKSKVEAICPGVVSCADIVAITARDSVVILGGPFWNVKVGRRDSRTANFNAANTGVIPPPTSNLNNLISTFKAQGLSAKDMVALSGAHTIGKSRCTSFRNHIYNDSNIDTTFAKIRQKNCPKKSGSGDNNLANLDFRTPTYFDNNYYKNLIIKRGLLHSDQVLFNGGSTDSFVKTYSQNDKAFDADFVAAMIRMGNNKPLTGKQGEIRKNCRRLN 320
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre6g00786 320 ProSitePatterns Peroxidases proximal heme-ligand signature. 185 195 IPR019793 -
Trre6g00786 320 Gene3D Peroxidase, domain 2 163 299 - -
Trre6g00786 320 CDD secretory_peroxidase 24 318 IPR033905 GO:0004601|GO:0042744
Trre6g00786 320 PRINTS Plant peroxidase signature 58 78 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre6g00786 320 PRINTS Plant peroxidase signature 117 127 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre6g00786 320 PRINTS Plant peroxidase signature 34 53 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre6g00786 320 PRINTS Plant peroxidase signature 98 111 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre6g00786 320 PRINTS Plant peroxidase signature 184 196 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre6g00786 320 PRINTS Plant peroxidase signature 136 151 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre6g00786 320 PRINTS Plant peroxidase signature 238 253 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre6g00786 320 PRINTS Plant peroxidase signature 294 307 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre6g00786 320 PRINTS Plant peroxidase signature 254 271 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre6g00786 320 PANTHER PEROXIDASE 72-RELATED 20 318 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre6g00786 320 ProSiteProfiles Plant heme peroxidase family profile. 24 320 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trre6g00786 320 ProSitePatterns Peroxidases active site signature. 56 67 IPR019794 GO:0004601
Trre6g00786 320 PRINTS Haem peroxidase superfamily signature 185 200 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trre6g00786 320 PRINTS Haem peroxidase superfamily signature 118 135 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trre6g00786 320 PRINTS Haem peroxidase superfamily signature 136 148 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trre6g00786 320 PRINTS Haem peroxidase superfamily signature 240 255 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trre6g00786 320 PRINTS Haem peroxidase superfamily signature 56 70 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trre6g00786 320 FunFam Peroxidase 28 175 - -
Trre6g00786 320 SUPERFAMILY Heme-dependent peroxidases 24 320 IPR010255 GO:0004601|GO:0006979|GO:0020037
Trre6g00786 320 Pfam Peroxidase 41 284 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trre6g00786 320 Gene3D - 28 317 - -
Trre6g00786 320 FunFam Peroxidase 163 299 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre6g00786 Trre-Chr6 6079093 6085825 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre6g00786 7 320 Peroxidase AT5G58400 64.650 6.21e-154 432
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre6g00786 K00430 - gmx:100813250 502.286