Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre6g00781 ATGGATAGTTCAAATAATATGGTGGATTGCGGTAGTATTCATCATGATGAAGTTATGAAAGTTGACAACATTAATGATGATGATGATGATGTATGTTGGGAGCCTGCAGCGGGGATGTGTTTTTCTTGTTTAGATGAAGTTAAATCTTTTTATGGAGAGTATGCTTTGAAAAAGGGTTTTCGGTGGAAGATTAGAACATCAAGAAAAGGACCGGACGGAGAAATATGCTACTTAATTCTAGCATGCTCAAGAGAGGGGTCTAAAGTCTCAAAGGTTTCGTGTATATCGAAGACACTTCCGGAAAAAGTGAAAAGTTGTCCTGCTAAGATTTGTGTTAAGATGGAAGAAGATGGATTGTGGTACATTAGAAAATTTGAAGCCGACCATTCTCACGAGACCAGCCCTACAAAGGCAAGAAGAAGGGAGAAACAAGATTCAAGCAGGGATCCTACTCCATCATTCTTTGTTCTTCATGAAGTAATTAGGGATTCAAATGGTAGAAGAATATTTGCTGAAGGAAGGCAAAATCTATATGATCTTATTGTAGTTGCAAAAATTGTGTAG 564 0.3759 MDSSNNMVDCGSIHHDEVMKVDNINDDDDDVCWEPAAGMCFSCLDEVKSFYGEYALKKGFRWKIRTSRKGPDGEICYLILACSREGSKVSKVSCISKTLPEKVKSCPAKICVKMEEDGLWYIRKFEADHSHETSPTKARRREKQDSSRDPTPSFFVLHEVIRDSNGRRIFAEGRQNLYDLIVVAKIV 187
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre6g00781 187 MobiDBLite consensus disorder prediction 132 151 - -
Trre6g00781 187 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 16 149 - -
Trre6g00781 187 Pfam FAR1 DNA-binding domain 49 133 IPR004330 -
Trre6g00781 187 MobiDBLite consensus disorder prediction 132 148 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre6g00781 Trre-Chr6 6063692 6067527 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Trre6g00781 FAR1 8.9e-14 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre6g00781 - - cam:101510307 202.216