Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre6g00757 ATGGCGAGTATCCTTACTGATTTGGTGAAGCCATATGTGGAGAAATTGATAAATGGGGCAATCACAGAATCAAGTTATATATGTTGTTTCACGTGCATTGCTAAAGATTTTGAAGATGAGAAAGCTAAGTTGGAAGTAGAAAGGACAACTTTCAACCAACAAGTTGATATAGCAACTAGAGGAGGGGAAGATGTTCAAGCTAGTGCTCTTTTTTGGGAAGAACAAGCTGTAGATCTCATTCAAGAAGACACCAAAACAAAACAAAAATGTTTTTTTGGGTTTTGTTGTAATTGCATATGGCGATATAGAAGGGGAAAGGAACTGGCAAATAAGAAGGAGCAAATCAAAAAATTGATTGAAACTAGAAAGGAACATGCAATTGGACTCCCTGCTCATCTTCCGGATGTTGAACGTTATTCATCCCAACACTATATTCCTTTTAAAAGTAGGGAATCCAAATGCAAAGAGCTTTTGGATGCACTGAATGATGACAACAATTATATAGTCGGGTTGCATGGGATGGGGGGCACAGGAAAAACTACACTGGCAAAGGAAGTGGGTAAGAAACTTAAGCAGTCTAAACAATTTACTCAAGTCGTCGATACGACAGTGTCATTTTCTCCTGATATTAAAAAGATTCAAGATGATATTGCTGGACCCTTGGGAATATCGAAATTTGATAAATGTAATGAATCAGACCGACCCAAAAAATTATGGAGCCGATTAACCAATGGTGAGAAGATTCTTTTAATATTGGATGATGTGTGGGGAGATATCAATTTTAGTGAAATAGGGATTCCATACAGTGACAATCGCAAAGGCTGCAGTGTTTTAGTTACCACTCGCAATTTGTCGGTGTGTAACAGACTAGGATGCAGTAGCACAATCCAACTGGATCTCTTATCTGAAGATGATGCATGGATCATGTTCCAAAGGCATGCTGGTCTAAGCGAAGCTTCAATAAAAGATTTGCTCGACAAGGGCCGTAAAATTGCTAATGAATGCAAAAGGCTACCAATTGCAATTGCTGCTATCGCTAGTAGTTTAAAGGGAAAAAAATACCGGGAAGAGTGGGATGTGGCCTTAAATTCCTTGCAGAAACATATGCCCGTGGATGGTGTTGATAATGATTTAGCTGACATTTATAAATGTTTAAAGTTTAGCTATGATTATCTCAAGAACAAAAATGCCGAGGAATTGTTCCTCTTAAGTTCTGTATTCCAAGAAGATGAAGAATTCTCTTTTGAAATTCTGACTAGGCTTGGCATAGGAGCTGGCCTCTTTGGGGAATGTAATGACAAATACAACAATACTCGAAATCTAGTAGTTGTAGCAAAAAATAAACTCCTTGATTCATGTTTACTGTTGAAGACAAATAAAGGAGATGTAAAAATGCATGACTTGATTCGTGAAGTAGCGCAATGGATAGCGAACAAAGATCAAACTCAAGTGGTAAATTTTTCTAACAAAAATCAAAAGTCATTAGTTGGAAGGGATAATAATATCAAATATTTGTTATTTGATGGAAATCCAAAGGATTTGTTTTCCTTTAGGTTTGATGGTTCTAAACTTATGATTCTGATTTTCAACATGGGGAGAGGTTGCTTTGAGGACGTTCCAGTTTCATTCTTTGAAAATATTGCAGGGCTTAGAGTTTTGAATTTAATAGCAAAACGGCAAACTATATCATTACCACCATCAATTCGGTCATTGAGGAATATTCGTTCTCTATTAGTTGAAAGGGCTAATTTCGGTGACATCTCTGTTTTGGAAAGCCTGCAAAGTCTTGAGACACTTGATTTGAAACATTGTAATATTGACAAACTTCCTGAAGAAATTGCACAATTAAGGGAACTTAGATTGTTGAACTTGGAAGACTGTACAATTGAAAGTAATAATCCATTTGAAGTTATCCAGAGATGCCAGTCCCTTGAAGAATTGTACTTCTGTCGTAGTTTCAATGATTTTTGTCAGGAAATAACCTTACCTACATTGGAAAGGTATCATCTAACTGATAGTTATCATATGATTTACGATTCTTCACTATCAAAATGCATGTGTCTTGAAAATGATTATTTGTCAAAAGCAACATTTAAGCATGTGATGCAAACATCGGAGCATGTTAGCTTGGAAAGAATCAAGAAAGAGTGGAAAAATCTCATGCCTGACATTGTTCCTATAGATCAAGGTATGAATGATCTAATTGAGCTTCATTTGAATGATGTTTCACAACTACAGTGCCTCGTAGACACCGAACATATTAGTTCTCAAGTACCAAATGTGTTTTCCAAGTTGGTTGTACTAGAGCTCAACCAAATGAATAATTTGGAAGAATTTTGCAACGGTCCCATCTCGCTTGACTCTATGGACAGCTTAGAAGAACTAACTATCATGTATTGTGGAAATTTGAGAAGCTTGTTTAAAGGCAATGTAAATCTCTGCAATCTAAAGACTGAAAATAGAAAGATGCTCCAAATTAGTTTCTGTTTTGTCACCTTCTGGAAGCCTGCCGCTGTTGGAAGAATTAAATATAAGCAATTATCCAAAAGTACTAAAGTCCCATCCGTGCTTTCTCAGGATCAGCCGCAACCCTGCTCAATCTGCACGGAAACTAGTTCATATTGTCTTAACATATGGGAACGTGCTCAATGTCTTTCGAGACTATCACATATCTTGTGCAATATTAGAGAGATAAAACTGTGGAATCTTTCAAAGATAAAATCAGTGTTTATGTTGTCTATTGCACCAAAGATGTCATTGGAGAGCTTGACTATTGCAGATTGTGATGAATTGGAACACGTAGTAGTAGACATTGGAGATGGCAGTGGTGGAAATGAATTGGGCAATGTCTTCCCAAAATTAAAAGAGCTCAATGTTGAAGATTGTGCGAAATTGAAATACATATTTGGACACATTAATGCTAGTGATGGTCATGATCAATGCAACAATGAGATTCAACTTCATATTCCAGCATTGAAAAGTCTCATGTTTGTAAAACTCCAAAGTTTAATCAGCATGTGTCCCAAACAATATCACACAACATTTCCAGCTTTGAAAAAAATTGAGCTCAATGAATGCTCTCAGGTTGATGTTAAATCTATTGGTGATTTTACCTTCCTTACTTCAATTTCAAGATATCTGGGCAGTACAACCATCAAGCAATTCAGTGGGAACATAGAACATTTTCTAGCTCTGGAAAGGCTCGAGTTGTCTATTCTAAGAATAGAAGAATGCAATGAGTTGAAGCATATCATTGAAGATGATGTAATGAGTTCAAAGACATGCTGCTTCCCAGTGCTAAAAGCCCTTGCAGTAGTAAAGTGCAACAAGTTGAAAAGTATCTTTCCTATCACCATGAGCAAAGAGCTTCCAAAGCTGGAGGCTATGATAATAACTGAAGCAGATGAGCTGGAAGACATATTCAAAAGTGTAGCTGATGATCAGAAAGTTAAGATTCCAAATCTGAAATTTGTAGGATTTGTCAACCTACCAAGCCTCTGCCATGTCCATGGAATTTTTCAGACAGTAGAAAATCGTTTCGTACAGAATTGTAAAAAACTCTCACTGACTTCGTTAAGATCTAGCAGAGATATTTGGAAGGATTTGCAGCGTCTAAGAGATGGCATAGATGATGATACTTATTCTGATCTGCGGCGTCTATGTCGAAAATTACAAGAAATGCCCAAAGGCTCAGACTTTGCAGATTTTTGTAATGAAAATCCACAGAAAGAAATGAAACAAACAGCAGAGACAGAGTATGAATTTAATGAAACTGTTCCTGATTTAGAGATACCATTTCAAGTTTCAACCACAGAGTGTCTTAACATCGAAGATGTTAATCTGGGAGCCTCACACGAAACAACTCAAACTAACAATCAAGTTTCTCTAAATGATGATGCGTTCATGCAAGTAAGCTCAACCATTGAACAACAGTTTCCTAAGGATGATGAAATAATAGTTTCTGGTTTATGGATGCCTTCAGCAGTAAATTCACCAGCAAATTCACAAAAATTGATGAATGAACAATCAATACATCAACAACGTTTGAAGAACCAAGAAAGTCCACTTGGAGAAATAGATGCTACCATAAAACCTTCTCAAGAACAAGATGTTGATGTCAGAGACTCTCAGAAAACTACTAAGACCAATAATGATCAAGTTTCTCTACATGACGGTGCTTTCATGAAAGTAAGCTCAATTATTGAACAACAATTTCCTAAGGATGATCCCTCTCCAAGCAATAGGCTTTCTTTTCCTTTTTCATTTCAAACTCATTCAATGCCTTTTCATAGGAACCCTTCTCAAGAAGTGGAAGACTCGAGTTCTCCTTCTTTTATCACATGCGAGCTTGAGCAGCTGGTCTCTAAGAAGCTTTTGGCTATTGAGAACTTGTCTCTGTTGACTGATTTTCTTGTTAAGCATCCTTCGGTTCTTTTAAGGGACACATCGCTTAGTAACAGATACAAGGGTTATGCGTATAACTGTCTTTCTGAGCTGTTGAAATTCCTCCAAACGCATAGTGTGCTGGATGTGTTAGGTTCAAGCCACTCTGAATTTGCCGAGTTATTAAAAGATGCACGCAGATTTCCTTTCGATAAGGATTGGTTAGACAGTGTTGAAAAGTGCTCTGTGTTTCCCGGTTTACAAGTCTCTCAAGCTGCACTGCAAAAATTGTTGGACTCAAAACACATCTTGACTCAACATGTGAAGGATCTTAAGCATCAATTGGCTTCCTCCGAAGCTGTTTTGGAGAGTATCATTCAACAGGAGGCACAAATTTTAGAAACACGGGCTGCTCTAAGTGATCCGATTGGCTATTAG 4821 0.3723 MASILTDLVKPYVEKLINGAITESSYICCFTCIAKDFEDEKAKLEVERTTFNQQVDIATRGGEDVQASALFWEEQAVDLIQEDTKTKQKCFFGFCCNCIWRYRRGKELANKKEQIKKLIETRKEHAIGLPAHLPDVERYSSQHYIPFKSRESKCKELLDALNDDNNYIVGLHGMGGTGKTTLAKEVGKKLKQSKQFTQVVDTTVSFSPDIKKIQDDIAGPLGISKFDKCNESDRPKKLWSRLTNGEKILLILDDVWGDINFSEIGIPYSDNRKGCSVLVTTRNLSVCNRLGCSSTIQLDLLSEDDAWIMFQRHAGLSEASIKDLLDKGRKIANECKRLPIAIAAIASSLKGKKYREEWDVALNSLQKHMPVDGVDNDLADIYKCLKFSYDYLKNKNAEELFLLSSVFQEDEEFSFEILTRLGIGAGLFGECNDKYNNTRNLVVVAKNKLLDSCLLLKTNKGDVKMHDLIREVAQWIANKDQTQVVNFSNKNQKSLVGRDNNIKYLLFDGNPKDLFSFRFDGSKLMILIFNMGRGCFEDVPVSFFENIAGLRVLNLIAKRQTISLPPSIRSLRNIRSLLVERANFGDISVLESLQSLETLDLKHCNIDKLPEEIAQLRELRLLNLEDCTIESNNPFEVIQRCQSLEELYFCRSFNDFCQEITLPTLERYHLTDSYHMIYDSSLSKCMCLENDYLSKATFKHVMQTSEHVSLERIKKEWKNLMPDIVPIDQGMNDLIELHLNDVSQLQCLVDTEHISSQVPNVFSKLVVLELNQMNNLEEFCNGPISLDSMDSLEELTIMYCGNLRSLFKGNVNLCNLKTENRKMLQISFCFVTFWKPAAVGRIKYKQLSKSTKVPSVLSQDQPQPCSICTETSSYCLNIWERAQCLSRLSHILCNIREIKLWNLSKIKSVFMLSIAPKMSLESLTIADCDELEHVVVDIGDGSGGNELGNVFPKLKELNVEDCAKLKYIFGHINASDGHDQCNNEIQLHIPALKSLMFVKLQSLISMCPKQYHTTFPALKKIELNECSQVDVKSIGDFTFLTSISRYLGSTTIKQFSGNIEHFLALERLELSILRIEECNELKHIIEDDVMSSKTCCFPVLKALAVVKCNKLKSIFPITMSKELPKLEAMIITEADELEDIFKSVADDQKVKIPNLKFVGFVNLPSLCHVHGIFQTVENRFVQNCKKLSLTSLRSSRDIWKDLQRLRDGIDDDTYSDLRRLCRKLQEMPKGSDFADFCNENPQKEMKQTAETEYEFNETVPDLEIPFQVSTTECLNIEDVNLGASHETTQTNNQVSLNDDAFMQVSSTIEQQFPKDDEIIVSGLWMPSAVNSPANSQKLMNEQSIHQQRLKNQESPLGEIDATIKPSQEQDVDVRDSQKTTKTNNDQVSLHDGAFMKVSSIIEQQFPKDDPSPSNRLSFPFSFQTHSMPFHRNPSQEVEDSSSPSFITCELEQLVSKKLLAIENLSLLTDFLVKHPSVLLRDTSLSNRYKGYAYNCLSELLKFLQTHSVLDVLGSSHSEFAELLKDARRFPFDKDWLDSVEKCSVFPGLQVSQAALQKLLDSKHILTQHVKDLKHQLASSEAVLESIIQQEAQILETRAALSDPIGY 1606
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre6g00757 1606 Coils Coil 1569 1589 - -
Trre6g00757 1606 Pfam NB-ARC domain 154 390 IPR002182 GO:0043531
Trre6g00757 1606 Gene3D - 132 296 IPR027417 -
Trre6g00757 1606 FunFam Probable disease resistance protein At1g61300 132 295 - -
Trre6g00757 1606 SUPERFAMILY L domain-like 464 834 - -
Trre6g00757 1606 PANTHER NB-ARC DOMAIN-CONTAINING PROTEIN-RELATED 882 1028 - -
Trre6g00757 1606 PRINTS Disease resistance protein signature 242 256 - -
Trre6g00757 1606 PRINTS Disease resistance protein signature 335 349 - -
Trre6g00757 1606 PRINTS Disease resistance protein signature 168 183 - -
Trre6g00757 1606 PRINTS Disease resistance protein signature 591 607 - -
Trre6g00757 1606 ProSiteProfiles Leucine-rich repeat profile. 595 616 IPR001611 GO:0005515
Trre6g00757 1606 MobiDBLite consensus disorder prediction 1333 1353 - -
Trre6g00757 1606 Gene3D - 300 393 IPR042197 -
Trre6g00757 1606 MobiDBLite consensus disorder prediction 1333 1386 - -
Trre6g00757 1606 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 144 394 IPR027417 -
Trre6g00757 1606 SUPERFAMILY RNI-like 727 1128 - -
Trre6g00757 1606 Coils Coil 34 54 - -
Trre6g00757 1606 Gene3D Ribonuclease Inhibitor 873 1156 IPR032675 -
Trre6g00757 1606 Gene3D Ribonuclease Inhibitor 456 872 IPR032675 -
Trre6g00757 1606 MobiDBLite consensus disorder prediction 1365 1379 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre6g00757 Trre-Chr6 5902694 5909734 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre6g00757 169 628 WRKY Transcription Factor Family AT5G45050 22.780 2.16e-12 70.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre6g00757 - - psat:127084401 1294.26