Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre6g00749 ATGGAAACACAAATGCAAGATCCACCATCAAACTCAAACTCTAATCCCAATGTCACATCATCATCAACTCCTTCTTCCAAAATCTTCATCCGCGGCACCGTTAACGGTGTTTCCACCACCGCATCTGTCGCCGCTGAATCCCACTCACACCACCGTAGATCACACTCAGAAATCAACTACCGTCTTCCCGACGACATGATGGACCTCTCTCCTTCAGATCTATTGAACGGAGGAGGATCTTCCACAGCGAGCTTTGAAGAAATCGGATCCGAAGATGACCTGTTTTTCACCTACATTGACGTCGAGAAGCTCGGAGGTGTTACCAACGGTTTGAATCGTGGTGGAAATGGATCTGATCAGAACGGTTATGGTAACGGTATCGGTAATGGTGTTGGAACGAGCGGTAATAACGACGGAGAGAAGAGTCCGAACGCTGCTACTACGCCGAGAACGAGACATAGACATAGTTGCTCCGTTGATGGTTCAACGTCGACGAGTATGTTTGGAGAGATCATGGATGCGAAGAAAGCTATGCCTCCTGATAAACTCGCTGAGCTTTGGACTATTGATCCAAAGCGTGCTAAGAGAATACTTGCAAACCGGCAATCTGCTGCACGGTCAAAAGAGAGAAAGGCCCGTTATATACAAGAACTTGAGCGCAAGGTTCAAACCCTTCAGACGGAAGCCACAACTCTCTCTGCTCAATTGACACTATATCAGAGGGACACAAGTGGTTTGAGTAATGAAAATACCGAGCTTAAGATCCGGCTGCAAGCCATGGAACAACAGGCACACCTTCGAGATGCTCTTAACGATGCATTGATGAAGGAAGTTGAGAGGCTTAAGATTGCTACTGGGGAGGCAATGAACCCCTCTGAATCTTTTAATATGGGAATGCACCAGATGCAATTTGGAGGGTCAAATTTCTTTTCAATGCCGCAACATTCCGGTCCTTCAGGTCACCACCAGGACATACAATTTCCTCAATTTGGTCACTCCCCATCTAACATGCCGAATCATCAGATGCAACAAACCAATTCTCACCAAATGTCGGACATGTTGCAAAATGATCAGCTCGGTCGTTTGCAGGGACTTGACATTAGTAGCAAAGGATCAACCCTCGTGAAGTCTGAAGGTCCGTCAATATCTGCAAGTGAGAGTAGCACTACATTTTGA 1176 0.4651 METQMQDPPSNSNSNPNVTSSSTPSSKIFIRGTVNGVSTTASVAAESHSHHRRSHSEINYRLPDDMMDLSPSDLLNGGGSSTASFEEIGSEDDLFFTYIDVEKLGGVTNGLNRGGNGSDQNGYGNGIGNGVGTSGNNDGEKSPNAATTPRTRHRHSCSVDGSTSTSMFGEIMDAKKAMPPDKLAELWTIDPKRAKRILANRQSAARSKERKARYIQELERKVQTLQTEATTLSAQLTLYQRDTSGLSNENTELKIRLQAMEQQAHLRDALNDALMKEVERLKIATGEAMNPSESFNMGMHQMQFGGSNFFSMPQHSGPSGHHQDIQFPQFGHSPSNMPNHQMQQTNSHQMSDMLQNDQLGRLQGLDISSKGSTLVKSEGPSISASESSTTF 391
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre6g00749 391 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 190 253 IPR004827 GO:0003700|GO:0006355
Trre6g00749 391 SMART brlzneu 188 252 IPR004827 GO:0003700|GO:0006355
Trre6g00749 391 CDD bZIP_plant_RF2 193 242 IPR044759 GO:0003700|GO:0006355
Trre6g00749 391 FunFam probable transcription factor PosF21 191 244 - -
Trre6g00749 391 SUPERFAMILY Leucine zipper domain 192 246 IPR046347 GO:0003700|GO:0006355
Trre6g00749 391 Pfam bZIP transcription factor 192 249 IPR004827 GO:0003700|GO:0006355
Trre6g00749 391 Coils Coil 243 263 - -
Trre6g00749 391 MobiDBLite consensus disorder prediction 108 164 - -
Trre6g00749 391 MobiDBLite consensus disorder prediction 371 391 - -
Trre6g00749 391 MobiDBLite consensus disorder prediction 111 164 - -
Trre6g00749 391 MobiDBLite consensus disorder prediction 1 26 - -
Trre6g00749 391 MobiDBLite consensus disorder prediction 310 349 - -
Trre6g00749 391 Gene3D - 192 243 - -
Trre6g00749 391 PANTHER TRANSCRIPTION FACTOR POSF21-RELATED 7 368 - -
Trre6g00749 391 Coils Coil 208 235 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre6g00749 Trre-Chr6 5827781 5830196 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre6g00749 5 391 bZIP Transcription Factor Family AT2G40620 46.226 6.51e-97 292
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Trre6g00749 bZIP_1 1e-08 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre6g00749 - - gmx:100775607 527.324