Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre6g00748 ATGGGTTCCCCTACAGTGGTTATTATTGGACAACAAGGAAACAAATTTATTCTTAGTTCCTCAGATGATGTTATTTCTGCAAAGAAACCTCCTACCTTTCAAAAGATACTTGGAAAACAAAGCCTAGTTGAACTTACTGGATCAAGACATAGGTTGATGAAGGGGGAAATGCTGAAATTCTTAAAATCTGAATGCCTTCAAAACTATGTGAAAAAGATGGATGAATTAGTGAACACAATATTACTAAGAGAATTGAAAGAGAACAAAACAATTGGAGTTGTGAGGTTGATGAAGAAACTTTCCTATGATATGGCATGCAATATATTGTTTGACATTAAAGATGAACAAACAAAGGAGGCTATGTTTGAAGATTTTATCACAGCATTTAAAGCACTTCACTCTCTTCCAATAAATTTCCCTGGCACCTCATTTTGGAAAGGCCAAAAGGCTAGAGCAAGAATTGTGGAAAAGATACTTCCTATTATGAACAAAAGAATGGAGGAATTGTCAAAAGGAATTTTAAGCTCTACTAATGATATGCTTTCTTGCCTTCTTGCAATAAGAGATGAAAATGGTCAACCTCTAGATGATGACATCATCACTGACAATTTTATTTTCCTATTTATTGCAAGTTATGATACATCTGCTACTCTTATAACCTTGATGATATGGAAGTTATCCAGAGATCAAGAGGTTTACAATAAAGTTTTAGAAGAACAAATGGAAATTTTAAAGCAAAGGGAAGGAAACGAAGACAGATTAACATGGAGAGAGATACAAAAGATGAAATACACATGGAGAGTTGCACAGGAATTGATGAGGATGATCCCACCTGCATTTGGTGGATTTAGGAAAGCTCTTGAAGATACTAGCTACGAAGGATATGACATACCAAAAGGGTGGACGGTATATTGGGCATTATGTGGAACACACATGAACGAAGATATATTTGAGGATCCACAAAAGTTTGATCCATCTCGTTTTGCAAATCAAGCTAAGCCAATCCCACCATTTTCTTACCTTCCATTTGGTGCAGGGGTTCATAGTTGCATAGGAAATGAGTTTGCTAGGGTTGAGACCTTAACTACCATTCACAATTTTGTGAAGTTGTATGAATGGTCTCAATTAAATCCAGAGGAAACTATTACTCGTCAACCAATGCCGTATCCATCCTTGGGTCTCCCAATTAAGATCAAACAGAGATGTAATATGTCTTAA 1218 0.3596 MGSPTVVIIGQQGNKFILSSSDDVISAKKPPTFQKILGKQSLVELTGSRHRLMKGEMLKFLKSECLQNYVKKMDELVNTILLRELKENKTIGVVRLMKKLSYDMACNILFDIKDEQTKEAMFEDFITAFKALHSLPINFPGTSFWKGQKARARIVEKILPIMNKRMEELSKGILSSTNDMLSCLLAIRDENGQPLDDDIITDNFIFLFIASYDTSATLITLMIWKLSRDQEVYNKVLEEQMEILKQREGNEDRLTWREIQKMKYTWRVAQELMRMIPPAFGGFRKALEDTSYEGYDIPKGWTVYWALCGTHMNEDIFEDPQKFDPSRFANQAKPIPPFSYLPFGAGVHSCIGNEFARVETLTTIHNFVKLYEWSQLNPEETITRQPMPYPSLGLPIKIKQRCNMS 405
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre6g00748 405 SUPERFAMILY Cytochrome P450 2 401 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre6g00748 405 Gene3D Cytochrome P450 1 401 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre6g00748 405 PRINTS P450 superfamily signature 210 227 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre6g00748 405 PRINTS P450 superfamily signature 341 350 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre6g00748 405 PRINTS P450 superfamily signature 267 278 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre6g00748 405 PRINTS P450 superfamily signature 350 361 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre6g00748 405 PANTHER CYTOCHROME P450 26 1 390 - -
Trre6g00748 405 Pfam Cytochrome P450 2 386 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre6g00748 405 FunFam Taxadiene 5-alpha hydroxylase 1 401 - -
Trre6g00748 405 PRINTS B-class P450 signature 267 278 IPR002397 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre6g00748 405 PRINTS B-class P450 signature 284 311 IPR002397 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre6g00748 405 PRINTS B-class P450 signature 350 361 IPR002397 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre6g00748 405 PRINTS B-class P450 signature 312 327 IPR002397 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre6g00748 405 PRINTS B-class P450 signature 341 350 IPR002397 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre6g00748 405 CDD CYP90-like 1 398 - -
Trre6g00748 405 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 343 352 IPR017972 GO:0005506|GO:0016705
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre6g00748 Trre-Chr6 5824108 5826560 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre6g00748 1 405 Cytochrome P450 AT4G19230 31.951 2.14e-61 204
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre6g00748 - - gmx:100790209 673.315