Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre6g00747 ATGGTTGAGAAAATACCTTTCCTTGTTTTATGTATGCTCACTTTGAGTTTAGCTTTTCTCCTAAAAAAAATTCTCACAAAAAGTCAAACAAAAAATGTTCCAAAAGGATCTTTGGGGTATCCTATTATTGGAGAGACATTTGGTTTTATTAAAGCACTGAAAAAAGACAAGGGGTCTGACTGGATAGAAGAAAGAGTATCTAAGTATGGCCCTGTCTTCAAAACATCCATAATGGGTTCCCCTACAGTGGTTATTATTGGACAACAAGGAAACAAATTTATTCTTAGTTCCTCAGATGATGTTATTTCTGCAAAGAAACCTCCTACCTTTCAAAAGATACTTGGAAAACAAAGCCTAGTTGAACTTACTGGATCAAGACATAGGTTGATGAAGGGGGAAATGCTGAAATTCTTAAAATCTGAATGCCTTCAAAACTATGTGAAAAAGATGGATGAATTAGTGAACACAATATTACTAAGAGAATTGAAAGAGAACAAAACAATTGGAGTTGTGAGGTTGATGAAGAAACTTTCCTATGATATGGCATGCAATATATTGTTTGACATTAAAGATGAACAAACAAAGGAGGCTATGTTTGAAGATTTTATCACAGCATTTAAAGCACTTCACTCTCTTCCAATAAATTTCCCTGGCACCTCATTTTGGAAAGGCCAAAAGGCTAGAGCAAGAATTGTGGAAAAGATACTTCCTATTATGAACAAAAGAATGGAGGAATTGTCAAAAGGAATTTTAAGCTCTACTAATGATATGCTTTCTTGCCTTCTTGCAATAAGAGATGAAAATGGTCAACCTCTAGATGATGACATCATCACTGACAATTTTATTTTCCTATTTATTGCAAGTTATGATACATCTGCTACTCTTATAACCTTGATGATATGGAAGTTATCCAGAGATCAAGAGGTTTACAATAAAGTTTTAGAAGAACAAATGGAAATTTTAAAGCAAAGGGAAGGAAACGAAGACAGATTAACATGGAGAGAGATACAAAAGATGAAATACACATGGAGAGTTGCACAGGAATTGATGAGGATGATCCCACCTGCATTTGGTGGATTTAGGAAAGCTCTTGAAGATACTAGCTACGAAGGATATGACATACCAAAAGGGTGGACGGTATATTGGGCATTATGTGGAACACACATGAACGAAGATATATTTGAGGATCCACAAAAGTTTGATCCATCTCGTTTTGCAAATCAAGCTAAGCCAATCCCACCATTTTCTTACCTTCCATTTGGTGCAGGGGTTCATAGTTGCATAGGAAATGAGTTTGCTAGGGTTGAGACCTTAACTACCATTCACAATTTTGTGAAGTTGTATGAATGGTCTCAATTAAATCCAGAGGAAACTATTACTCGTCAACCAATGCCGTATCCATCCTTGGGTCTCCCAATTAAGATCAAACAGAGATGTAATATGTCTTAA 1449 0.3561 MVEKIPFLVLCMLTLSLAFLLKKILTKSQTKNVPKGSLGYPIIGETFGFIKALKKDKGSDWIEERVSKYGPVFKTSIMGSPTVVIIGQQGNKFILSSSDDVISAKKPPTFQKILGKQSLVELTGSRHRLMKGEMLKFLKSECLQNYVKKMDELVNTILLRELKENKTIGVVRLMKKLSYDMACNILFDIKDEQTKEAMFEDFITAFKALHSLPINFPGTSFWKGQKARARIVEKILPIMNKRMEELSKGILSSTNDMLSCLLAIRDENGQPLDDDIITDNFIFLFIASYDTSATLITLMIWKLSRDQEVYNKVLEEQMEILKQREGNEDRLTWREIQKMKYTWRVAQELMRMIPPAFGGFRKALEDTSYEGYDIPKGWTVYWALCGTHMNEDIFEDPQKFDPSRFANQAKPIPPFSYLPFGAGVHSCIGNEFARVETLTTIHNFVKLYEWSQLNPEETITRQPMPYPSLGLPIKIKQRCNMS 482
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre6g00747 482 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 420 429 IPR017972 GO:0005506|GO:0016705
Trre6g00747 482 PANTHER CYTOCHROME P450 26 31 467 - -
Trre6g00747 482 PRINTS P450 superfamily signature 287 304 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre6g00747 482 PRINTS P450 superfamily signature 418 427 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre6g00747 482 PRINTS P450 superfamily signature 427 438 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre6g00747 482 PRINTS P450 superfamily signature 344 355 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre6g00747 482 Gene3D Cytochrome P450 23 478 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre6g00747 482 FunFam Taxadiene 5-alpha hydroxylase 24 478 - -
Trre6g00747 482 CDD CYP90-like 65 475 - -
Trre6g00747 482 SUPERFAMILY Cytochrome P450 31 478 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre6g00747 482 Pfam Cytochrome P450 34 463 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre6g00747 482 PRINTS E-class P450 group I signature 276 293 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre6g00747 482 PRINTS E-class P450 group I signature 383 407 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre6g00747 482 PRINTS E-class P450 group I signature 417 427 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre6g00747 482 PRINTS E-class P450 group I signature 66 85 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre6g00747 482 PRINTS E-class P450 group I signature 427 450 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre6g00747 Trre-Chr6 5823877 5826560 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre6g00747 7 458 Cytochrome P450 AT5G45340 32.308 6.78e-73 235
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre6g00747 - - gmx:100790209 783.482