Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre6g00746 ATGGTTGAGCAAATACCTTTCATTGTTTTATGTGTACTCACTTTGAGTTTAGCTTTTCTCCTCACAAAATTTCTCTCAAAAAGTCAACTAAAAAATGTTCCAAAAGGATCTTTGGGGTATCCTATTATTGGAGAGACACTTAGTTTTCTTAAAGCACAAAGGAAAGACAAGGGCTCTGATTGGATAGAAGAAAGAGTATCTAAGTATGGTTCTGTTTTCAAAACCTCCTTAATGGGTTCACCTACAGTGTTTATTATTGGACAACAAGGAAACAAGTTTGTTCTTAGCACCTCAGATGATATTATTTCAGCTAAGAAACCCCCCACCCTTCAAAAGTTACTTGGAAAGCAAAGCCTAATTGAACTTACTGGATTAAGGCACAAGTTGATAAAGGGAGAAATGATGAAATTCTTGAAACCTGAATGCCTTCAAAACTATGTCAAAAAGATGGATGAATTAGTGAGCACAGTATTACTTAAAGAATTGAAAGAAAATAAAACAATTGAAGTTGTGAGCTTGATGAAGAAACTGTCCTATGATATGGCATGCAATGTATTATTTGACATAGATGAACAAACAAGGGAGATTCTATTTGAAGATTTTATCACAGCATTTAAAGCAATTCACTCTCTTCCAATAAATTTCCCTGGCACCTCATTTTGGAAAGGCCAAAAGGCTAGAGCAAGAATTGTGGAAAAGATACTTCCTATTATGAACAAAAGAAGGGAGGAATTGTCAAAAGGAATTCTAAGCTCTACTAATGATATGCTTTCTTGCTTTCTTGCAATAAGGGATGAAAATGATGATCCTTTAGATGATGACATAATTACTGACAATTTTATTTTTCTATTTGTTGCAAGTCATGACACATCTGCCACCCTAATGAGTTTGATGATATGGAAGTTATCTAGAGATCATGATGTTTACCATAAAGTTTTAGAAGAACATAAGGAAATTATAAAGCAAAAGGAAGGAAATGAAGAAAGGCTAACATGGGGAGATATACAAAAGATGAAATATACATGGAGAGTTGCTCAAGAATTGATGAGGACGGTCCCTCCTTTGTTCGGCGGCTTTAGGAAAGCACTTAAAGATACTAGTTACGAAGGATATAACATACCAAAAGGGTGGCAGGTATATTGGGCATCATGTGGAACACATATGGACAAAGATATATTTGAGAATCCACAAGAGTTTGATCCATCTCGTTTTGAAAATCAAACTAAGCCAATTCCACCCTTTTCTTATCTTCCATTTGGTGCAGGGGTTCATAATTGCATAGGAAATGAGTTTGCTAGGGTTGAGACCTTAACTACCATTCACAATTTTGTGAAGTTGTATGAATGGTCTCAATTAAATCCAGAGGAAACTATTACTCGTCAACCAATGCCATATCCATCTTTGGGTCTCCCAATTAAGATCAAACCAAGATGTAATAATATGTCTTCTTAA 1452 0.3512 MVEQIPFIVLCVLTLSLAFLLTKFLSKSQLKNVPKGSLGYPIIGETLSFLKAQRKDKGSDWIEERVSKYGSVFKTSLMGSPTVFIIGQQGNKFVLSTSDDIISAKKPPTLQKLLGKQSLIELTGLRHKLIKGEMMKFLKPECLQNYVKKMDELVSTVLLKELKENKTIEVVSLMKKLSYDMACNVLFDIDEQTREILFEDFITAFKAIHSLPINFPGTSFWKGQKARARIVEKILPIMNKRREELSKGILSSTNDMLSCFLAIRDENDDPLDDDIITDNFIFLFVASHDTSATLMSLMIWKLSRDHDVYHKVLEEHKEIIKQKEGNEERLTWGDIQKMKYTWRVAQELMRTVPPLFGGFRKALKDTSYEGYNIPKGWQVYWASCGTHMDKDIFENPQEFDPSRFENQTKPIPPFSYLPFGAGVHNCIGNEFARVETLTTIHNFVKLYEWSQLNPEETITRQPMPYPSLGLPIKIKPRCNNMSS 483
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre6g00746 483 PRINTS E-class P450 group IV signature 60 83 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre6g00746 483 PRINTS E-class P450 group IV signature 426 444 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre6g00746 483 PRINTS E-class P450 group IV signature 387 405 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre6g00746 483 PRINTS E-class P450 group IV signature 410 426 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre6g00746 483 PRINTS P450 superfamily signature 286 303 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre6g00746 483 PRINTS P450 superfamily signature 343 354 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre6g00746 483 PRINTS P450 superfamily signature 417 426 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre6g00746 483 PRINTS P450 superfamily signature 426 437 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre6g00746 483 FunFam Taxadiene 5-alpha hydroxylase 24 477 - -
Trre6g00746 483 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 419 428 IPR017972 GO:0005506|GO:0016705
Trre6g00746 483 Pfam Cytochrome P450 34 462 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre6g00746 483 PANTHER CYTOCHROME P450 26 30 466 - -
Trre6g00746 483 Gene3D Cytochrome P450 24 477 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre6g00746 483 SUPERFAMILY Cytochrome P450 31 477 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre6g00746 483 CDD CYP90-like 65 476 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre6g00746 Trre-Chr6 5817947 5820981 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre6g00746 7 452 Cytochrome P450 AT4G19230 35.033 5.20e-77 247
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre6g00746 - - gmx:100790209 775.393