Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre6g00744 ATGGGTTACATTCCTAGTTTCATCTCGTTACTCCCTCAGTCCCTTTGGCCTCTTTTTCATGTTATATTTTTTGGTTTTATGGTAATAATCAAAACCATAAGAAAAAGATCCCAGAATCCTAACAAATATAAACTGCCACCAGGTCCCAAACCATGGCCAATAGTTGGTAATCTTCCTGACATGCTTGCAAACAATTCTCCAACTAGGTGGATACACAAAATAATGGAAGAAATGAACACTGAAATAGCATGTATCCGTCTAGGAAATGTCCATGTTATCCCTATTACTTGTCCCACCATTGCATGTGAATTCTTGAGGAAACATGATGCTGATTTTGCATCAAGACCACTAAGCATGGCCAGTGATATCATCTCCAATGGCTACTTGACAACAGTTCTTGTACCATATGGAGAACAATGGAAAAAGATGAAAAAAATCATTGTTAACAATTTGTTATCTCCATTTAGACATCAATGGCTTCAAGATAAAAGGAATGAAGAAGCCGATAATCTTATGTTTTATGTGTACAACAAATGCAATAATGGTGGCCTTGTGGATATTAGAATTGCTACACAACATTATTGTGGTAATGTGTTTAGGAAATTGTTTTTTAATACAAGGTACTTTGGAAAGGGTATGAAGAATGGAGGACCTGGTGTTGAGGAAGTTGAACATGTTGATGCTGTTTTCATATTGCTTAACTATGTTTTTGCTTTCTCTACATCTAATTATATACCATGGTTGAGGTTACTTGACTTAGATGGCCATAAGGGGGAGATAAAAAATGCAATGAGGATAATGAACAAGTATCATGATTCTATCATTGATGAGAGAATCAAACAGTGGAACAATGGATCAAAGAATGTTGAAGAAGACATGCTAGATGTCTTGATTTCCCAGAAAGATGTCAATAATAATCCATTATTGACAACGAAGGAAATCAAGGCACAAGCTATTGAATTGATGATGGCAATGGTAGACAATCCATCAAATGTGGTTGAGTGGACATTGGCAGAAATGTTAAATCAACCTGAATTATTTCAAAAAGCCGTAGAAGAATTAGATAATATAGTTGGAAAAGATAGATTAGTTCAAGAATCAGATATTCCTAAACTCAACTTCTTAAAGGCTTGTGCAAGAGAAGCTTTTCGCCTTCATCCTATAACAGCTTTCAATGTTCCCCATGTTGCTATGAATGATACAGTGGTTGGAAATTACTTGATACCAAAGGGTAGCCATATATTGCTTGGAAGAAGTGGTCTTGGGACAAACCCAAAAGTTTGGAGTGAACCTTACAAATTCAAACCAGAACGTCATCTCAAGAGTGATGGATCTAATATAAATTTGACAGAGCCAAATTTAAAGTTCATATCTTTCAGTACAGGAAGGCGTGGTTGTCCGGGTGTCACGCTTGGGACAACAATGACAATATTGCTATTAGCTAGGTTGCTTCATGGCTTCACTTGGAGTGCACCTTCTGATATATCAAGACTTAATTGTGCAGAATCCAATGGTGTTATGTTTCTTGATGAGCCATTGCAGGCTGTAGCAAAACCACGATTAGCAGCAAAATTGTATAACTTTGGTCAACTAGTCTAG 1599 0.3665 MGYIPSFISLLPQSLWPLFHVIFFGFMVIIKTIRKRSQNPNKYKLPPGPKPWPIVGNLPDMLANNSPTRWIHKIMEEMNTEIACIRLGNVHVIPITCPTIACEFLRKHDADFASRPLSMASDIISNGYLTTVLVPYGEQWKKMKKIIVNNLLSPFRHQWLQDKRNEEADNLMFYVYNKCNNGGLVDIRIATQHYCGNVFRKLFFNTRYFGKGMKNGGPGVEEVEHVDAVFILLNYVFAFSTSNYIPWLRLLDLDGHKGEIKNAMRIMNKYHDSIIDERIKQWNNGSKNVEEDMLDVLISQKDVNNNPLLTTKEIKAQAIELMMAMVDNPSNVVEWTLAEMLNQPELFQKAVEELDNIVGKDRLVQESDIPKLNFLKACAREAFRLHPITAFNVPHVAMNDTVVGNYLIPKGSHILLGRSGLGTNPKVWSEPYKFKPERHLKSDGSNINLTEPNLKFISFSTGRRGCPGVTLGTTMTILLLARLLHGFTWSAPSDISRLNCAESNGVMFLDEPLQAVAKPRLAAKLYNFGQLV 532
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre6g00744 532 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 459 468 IPR017972 GO:0005506|GO:0016705
Trre6g00744 532 Gene3D Cytochrome P450 38 526 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre6g00744 532 FunFam Cytochrome P450 9 38 524 - -
Trre6g00744 532 Pfam Cytochrome P450 46 514 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre6g00744 532 SUPERFAMILY Cytochrome P450 41 520 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre6g00744 532 PRINTS E-class P450 group I signature 456 466 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre6g00744 532 PRINTS E-class P450 group I signature 376 394 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre6g00744 532 PRINTS E-class P450 group I signature 100 121 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre6g00744 532 PRINTS E-class P450 group I signature 466 489 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre6g00744 532 PRINTS E-class P450 group I signature 333 359 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre6g00744 532 PRINTS E-class P450 group I signature 417 441 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre6g00744 532 PANTHER CYTOCHROME P450 98A9 16 527 - -
Trre6g00744 532 CDD CYP79 80 521 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre6g00744 Trre-Chr6 5809583 5811754 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre6g00744 13 526 Cytochrome P450 AT4G39950 53.965 0.0 584
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre6g00744 - K14984 lja:Lj3g3v0755150.1 746.888