Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre6g00743 ATGGTAATCAAAACCATAAGATACAAGAAACTTAACAAACCTAAACTTCCCCCAGGTCCCAAACCATGGCCTATAGTTGGTAATCTTCCTGAAATGCTTGCAAACAAACCTACAACTAGGTGGATACATAAAATGATGGAAGAACTGAACACCGAAATAGCATGCATCCGTCTAGGAAATGTCCATGTTATCCCTGTTACTTGTCCCACCATTGCCTATGAATTCTTCAGAAAACATGACGCCGATTTTGCATCAAGGCCACTGAGCATGGCCAGTGATATCATCTCCAATGGCTACTTGTCATCAGTTCTTGTACCCTATGGAGAACAATGGAAAAAGATGAAGAAAATCATTGTTAACGATTTGTTATCTCCATTTAGACATCAATGGCTTCAAGATAAAAGGAACGAAGAAGCCGATAATCTTATGTTTTATGTGTACAACAAATGCAATAATAATGGTGGCCTTGTGAATATTAGAATTGCTACACAACATTATTGTGGTAATGTGTTTAGGAAATTGTTTTTTAATACAAGGTACTTTGGAAAGGGTATGAAGGATGGAGGGCCCGGTCTTGAAGAAATTGAACATGTTGATGCTGCTTTTATATTGCTTAATTATGCTTTTGCTTTCTCTCCATCTGATTATATCCCATGGTTGAGGCTACTTGACTTGGATGGCCATAAGGGCAAGGTAAAAAATGCAATGAGGATAATGAACAAGTATCATGATTCCATCATTGATGAGAGAATCAAACAATGGAATGATGGATCAAAGAAAGTTGAAGAGGATTTGCTAGATGTTTTACTCTCCCTCAAAGATGTCAATAATATTCCGTTATTGTCAACTAAAGAAATCAAGGCACAAATTATTGAATTGATGAATGCAATGGTCGATAATCCATCGAACGTGGTTGAATGGATATTGATTGAAATGTTAAATCAACCTGAACTATTTCAAAAGGCCACAGAAGAGTTGGACAATATAGTTGGAAAAAATAGGTTGGTCCAAGAATCAGATATTCCTAAGCTCAACTTCTTGAAGGCTTGTGCAAGAGAAGCTTTTCGCCTTCATCCCATAACAACATTCAATGTTCCCCATGTTGCTATGAATGATACAATAGTTGGAAATTACTTGATACCAAAGGGTAGCCATATATTGCTTGGAAGAAGTGGTCTTGGGACAAACCCAAAAGTATGGAGTGAACCTTACAAATTCAAACCAGAACGTCATCTCAAGAATGATGGGTCGAATATAACTTTGACAGAACCACATTTAAGGTTCATATCTTTTAGTACCGGAAGGCGTGGTTGCCCTGGTGTCATGCTTGGAACTACAATGACTATTTTATTATTAGCTAGGATTCTCCATGGGTTCACTTGGAGTGCACCTCCCAATATATCAAGAATCAATGTTGTTGAGTCCAAAGGTATTATGTCTTTTGCTGAGCCACTTATAATTGTAGCAAAGCCACGATTAACAGCAAAATTGTACAACTTTCAATGGAAGTGA 1512 0.3743 MVIKTIRYKKLNKPKLPPGPKPWPIVGNLPEMLANKPTTRWIHKMMEELNTEIACIRLGNVHVIPVTCPTIAYEFFRKHDADFASRPLSMASDIISNGYLSSVLVPYGEQWKKMKKIIVNDLLSPFRHQWLQDKRNEEADNLMFYVYNKCNNNGGLVNIRIATQHYCGNVFRKLFFNTRYFGKGMKDGGPGLEEIEHVDAAFILLNYAFAFSPSDYIPWLRLLDLDGHKGKVKNAMRIMNKYHDSIIDERIKQWNDGSKKVEEDLLDVLLSLKDVNNIPLLSTKEIKAQIIELMNAMVDNPSNVVEWILIEMLNQPELFQKATEELDNIVGKNRLVQESDIPKLNFLKACAREAFRLHPITTFNVPHVAMNDTIVGNYLIPKGSHILLGRSGLGTNPKVWSEPYKFKPERHLKNDGSNITLTEPHLRFISFSTGRRGCPGVMLGTTMTILLLARILHGFTWSAPPNISRINVVESKGIMSFAEPLIIVAKPRLTAKLYNFQWK 503
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre6g00743 503 PANTHER CYTOCHROME P450 98A9 6 499 - -
Trre6g00743 503 CDD CYP79 51 493 - -
Trre6g00743 503 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 431 440 IPR017972 GO:0005506|GO:0016705
Trre6g00743 503 PRINTS E-class P450 group I signature 166 184 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre6g00743 503 PRINTS E-class P450 group I signature 348 366 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre6g00743 503 PRINTS E-class P450 group I signature 428 438 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre6g00743 503 PRINTS E-class P450 group I signature 438 461 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre6g00743 503 PRINTS E-class P450 group I signature 389 413 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre6g00743 503 PRINTS E-class P450 group I signature 71 92 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre6g00743 503 PRINTS E-class P450 group I signature 305 331 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre6g00743 503 FunFam Cytochrome P450 9 9 496 - -
Trre6g00743 503 Gene3D Cytochrome P450 9 498 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre6g00743 503 SUPERFAMILY Cytochrome P450 17 492 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre6g00743 503 Pfam Cytochrome P450 17 479 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre6g00743 Trre-Chr6 5797793 5800274 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre6g00743 13 498 Cytochrome P450 AT4G39950 55.236 0.0 576