Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre6g00742 ATGAATTACACTCTTAGTTTCTTCTGGTTACTTTCTAAATTCTTTTGGCCTCTTTTTCTTGTTATGTTTTTTTCCTTTATGGTAATCAAAACCATAAGATACAAGAAACTTAACAAACCTAAACTTCCCCCAGGTCCCAAACCATGGCCTATAGTTGGTAATCTTCCTGAAATGCTTGCAAACAAACCTACAACTAGGTGGATACATAAAATGATGGAAGAACTGAACACCGAAATAGCATGCATCCGTCTAGGAAATGTCCATGTTATCCCTGTTACTTGTCCCACCATTGCCTATGAATTCTTCAGAAAACATGACGCCGATTTTGCATCAAGGCCACTGAGCATGGCCAGTGATATCATCTCCAATGGCTACTTGTCATCAGTTCTTGTACCCTATGGAGAACAATGGAAAAAGATGAAGAAAATCATTGTTAACGATTTGTTATCTCCATTTAGACATCAATGGCTTCAAGATAAAAGGAACGAAGAAGCCGATAATCTTATGTTTTATGTGTACAACAAATGCAATAATAATGGTGGCCTTGTGAATATTAGAATTGCTACACAACATTATTGTGGTAATGTGTTTAGGAAATTGTTTTTTAATACAAGGTACTTTGGAAAGGGTATGAAGGATGGAGGGCCCGGTCTTGAAGAAATTGAACATGTTGATGCTGCTTTTATATTGCTTAATTATGCTTTTGCTTTCTCTCCATCTGATTATATCCCATGGTTGAGGCTACTTGACTTGGATGGCCATAAGGGCAAGGTAAAAAATGCAATGAGGATAATGAACAAGTATCATGATTCCATCATTGATGAGAGAATCAAACAATGGAATGATGGATCAAAGAAAGTTGAAGAGGATTTGCTAGATGTTTTACTCTCCCTCAAAGATGTCAATAATATTCCGTTATTGTCAACTAAAGAAATCAAGGCACAAATTATTGAATTGATGAATGCAATGGTCGATAATCCATCGAACGTGGTTGAATGGATATTGATTGAAATGTTAAATCAACCTGAACTATTTCAAAAGGCCACAGAAGAGTTGGACAATATAGTTGGAAAAAATAGGTTGGTCCAAGAATCAGATATTCCTAAGCTCAACTTCTTGAAGGCTTGTGCAAGAGAAGCTTTTCGCCTTCATCCCATAACAACATTCAATGTTCCCCATGTTGCTATGAATGATACAATAGTTGGAAATTACTTGATACCAAAGGGTAGCCATATATTGCTTGGAAGAAGTGGTCTTGGGACAAACCCAAAAGTATGGAGTGAACCTTACAAATTCAAACCAGAACGTCATCTCAAGAATGATGGGTCGAATATAACTTTGACAGAACCACATTTAAGGTTCATATCTTTTAGTACCGGAAGGCGTGGTTGCCCTGGTGTCATGCTTGGAACTACAATGACTATTTTATTATTAGCTAGGATTCTCCATGGGTTCACTTGGAGTGCACCTCCCAATATATCAAGAATCAATGTTGTTGAGTCCAAAGGTATTATGTCTTTTGCTGAGCCACTTATAATTGTAGCAAAGCCACGATTAACAGCAAAATTGTACAACTTTCAATGGAAGTGA 1590 0.3698 MNYTLSFFWLLSKFFWPLFLVMFFSFMVIKTIRYKKLNKPKLPPGPKPWPIVGNLPEMLANKPTTRWIHKMMEELNTEIACIRLGNVHVIPVTCPTIAYEFFRKHDADFASRPLSMASDIISNGYLSSVLVPYGEQWKKMKKIIVNDLLSPFRHQWLQDKRNEEADNLMFYVYNKCNNNGGLVNIRIATQHYCGNVFRKLFFNTRYFGKGMKDGGPGLEEIEHVDAAFILLNYAFAFSPSDYIPWLRLLDLDGHKGKVKNAMRIMNKYHDSIIDERIKQWNDGSKKVEEDLLDVLLSLKDVNNIPLLSTKEIKAQIIELMNAMVDNPSNVVEWILIEMLNQPELFQKATEELDNIVGKNRLVQESDIPKLNFLKACAREAFRLHPITTFNVPHVAMNDTIVGNYLIPKGSHILLGRSGLGTNPKVWSEPYKFKPERHLKNDGSNITLTEPHLRFISFSTGRRGCPGVMLGTTMTILLLARILHGFTWSAPPNISRINVVESKGIMSFAEPLIIVAKPRLTAKLYNFQWK 529
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre6g00742 529 CDD CYP79 77 519 - -
Trre6g00742 529 Pfam Cytochrome P450 43 505 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre6g00742 529 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 457 466 IPR017972 GO:0005506|GO:0016705
Trre6g00742 529 PRINTS E-class P450 group I signature 415 439 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre6g00742 529 PRINTS E-class P450 group I signature 331 357 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre6g00742 529 PRINTS E-class P450 group I signature 374 392 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre6g00742 529 PRINTS E-class P450 group I signature 454 464 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre6g00742 529 PRINTS E-class P450 group I signature 464 487 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre6g00742 529 PRINTS E-class P450 group I signature 97 118 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre6g00742 529 SUPERFAMILY Cytochrome P450 43 518 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre6g00742 529 Gene3D Cytochrome P450 35 524 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre6g00742 529 PANTHER CYTOCHROME P450 703A2-RELATED-RELATED 14 525 - -
Trre6g00742 529 FunFam Cytochrome P450 9 35 522 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre6g00742 Trre-Chr6 5797793 5800352 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre6g00742 4 524 Cytochrome P450 AT4G39950 52.682 0.0 577
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre6g00742 - K14984 gmx:100787378 717.998