Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre6g00736 ATGAACCTTAATAAAGTCAAACTTCCACCTGGTCCTAAACCATGGCCAATAGTTGGTAATCTTCCTAAAATGCTTGCAAACAATTCCCCAACTAGGTGGATACACAAAGTGATGGAAGAATTGAACACTGAAATAGCATGTATCCGTCTAGGAAATGTCCATGTTATCCCTGTTACTTGTCCCATCATTGCACTTGAATTCATTAGGAAACATGATGCTGCTTTTGCTTCAAGACCAATATCAATGTCCACTGATATCATCAGCAAAGGTTTCTTGACAACAGCTGTTACACCATTTGGGGGACAATGGAAAAAAATGAAGAAAATATTTGTTAATGAATTGTTCTCCCCCCACAAACATCAATGGCTCACAAACAAAAGGAACGAAGAAGCCGATAATCTCATGTTTTATGTCTACAACAAATGCAAAAATATGGATGATGATGATGATGTTCTTGTGAATGTTAGGATTGTTGCACGACATTTTTGTTGTAATTTGATGAGGAAATTGGTTTTCAATACAAGGTACTTTGGAGAAGGTAGTAATGATGGAGGTCCTGGTGTTGAGGAAGTGGAATATGTAGATGCCATTTTCACATTGCTTAGGTATGTTTTCGCCTTTTGTGTTTCTGACTATATGCCTTTGTTGAGGGGACTTGACATTGATGGTCATGAGAGAAAGGTGAAGGATGCTATGAGTATTGTGAACAAGTACAATGATCCAATCATTGAAAGGAGAATTGAAAAATCGAAAGATGGATCAAAGACTAGTGCTGATGCAGAGGACTTGCTTGATATTCTAATCTCTCTCAAAGATGCCAACAACAAACCATTATTGACATCAGATGAAATCAAGGCTCAAGCTATAGAACTTGTGCTGGGAGGAGTAGATAATCCATCACATGCAGCTGAATTTGCAATATCAGAAATGATAAATCAACCAGATTTACTTCAACGAGCCACTGAAGAATTGGACAATGTCGTAGGAAAACACAGACTAGTCCAAGAATCAGATATCCCAAAACTCAATTATGTGAAAGCTTGTGCTAGAGAAGCTTTTCGTCTTCATCCCATTACAATTTTTAATCCTCCCCATGTTGCTATGGACAACATAATGGTTGGTAATTACATGATCCCAAAAGGTAGCCATGTACTCCTAAGCAAACAAGGACTTGGTCGAAATCCAAAAGTTTGGAATGAACCTTACAAGTTTAAACCAGAACGACATTTAAAATATGACGGATCTATGGTAGTTTTGGCGGAACCAGATTTAAAATTCATATCATTTAGTACTGGAAGGCGCGGTTGTCCTGGAATTGTGCTTGGAACTACAATGACTATAATGTTATTGGGTAGATTGCTCCATGGCTTCAATTGGAGTGGACCTCCTAATGTATCAACCATTGATCTTCTCAAGTATTCTAATGGTGATAGATACCTTGGAGGCCCACTTATGGCAATGGCAAAGCCAAGATTGGCAGTCGAATTGTATCATCCATAA 1500 0.382 MNLNKVKLPPGPKPWPIVGNLPKMLANNSPTRWIHKVMEELNTEIACIRLGNVHVIPVTCPIIALEFIRKHDAAFASRPISMSTDIISKGFLTTAVTPFGGQWKKMKKIFVNELFSPHKHQWLTNKRNEEADNLMFYVYNKCKNMDDDDDVLVNVRIVARHFCCNLMRKLVFNTRYFGEGSNDGGPGVEEVEYVDAIFTLLRYVFAFCVSDYMPLLRGLDIDGHERKVKDAMSIVNKYNDPIIERRIEKSKDGSKTSADAEDLLDILISLKDANNKPLLTSDEIKAQAIELVLGGVDNPSHAAEFAISEMINQPDLLQRATEELDNVVGKHRLVQESDIPKLNYVKACAREAFRLHPITIFNPPHVAMDNIMVGNYMIPKGSHVLLSKQGLGRNPKVWNEPYKFKPERHLKYDGSMVVLAEPDLKFISFSTGRRGCPGIVLGTTMTIMLLGRLLHGFNWSGPPNVSTIDLLKYSNGDRYLGGPLMAMAKPRLAVELYHP 499
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre6g00736 499 PANTHER CYTOCHROME P450 703A2-RELATED-RELATED 5 497 - -
Trre6g00736 499 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 429 438 IPR017972 GO:0005506|GO:0016705
Trre6g00736 499 FunFam Cytochrome P450 9 1 495 - -
Trre6g00736 499 SUPERFAMILY Cytochrome P450 7 491 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre6g00736 499 Gene3D Cytochrome P450 2 474 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre6g00736 499 PRINTS E-class P450 group I signature 63 84 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre6g00736 499 PRINTS E-class P450 group I signature 346 364 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre6g00736 499 PRINTS E-class P450 group I signature 387 411 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre6g00736 499 PRINTS E-class P450 group I signature 283 300 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre6g00736 499 PRINTS E-class P450 group I signature 436 459 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre6g00736 499 PRINTS E-class P450 group I signature 303 329 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre6g00736 499 PRINTS E-class P450 group I signature 162 180 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre6g00736 499 PRINTS E-class P450 group I signature 426 436 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre6g00736 499 Pfam Cytochrome P450 9 468 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre6g00736 Trre-Chr6 5773721 5776252 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre6g00736 1 497 Cytochrome P450 AT2G22330 52.165 0.0 548
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre6g00736 - K14984 gmx:100809902 701.434