Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre6g00735 ATGAGTTACACTCCTACTTTCCTCTTGCTACTCCCTCGGTCCTTTTGGCCTCTTTTCCTTGTGATGTTTTTTCTCATGGTTTTGATTTCCAAAAAGTTTATGGTAATCAAAACCATAAGACACTTTTTAATTATGAACCTTAATAAAGTCAAACTTCCACCTGGTCCTAAACCATGGCCAATAGTTGGTAATCTTCCTAAAATGCTTGCAAACAATTCCCCAACTAGGTGGATACACAAAGTGATGGAAGAATTGAACACTGAAATAGCATGTATCCGTCTAGGAAATGTCCATGTTATCCCTGTTACTTGTCCCATCATTGCACTTGAATTCATTAGGAAACATGATGCTGCTTTTGCTTCAAGACCAATATCAATGTCCACTGATATCATCAGCAAAGGTTTCTTGACAACAGCTGTTACACCATTTGGGGGACAATGGAAAAAAATGAAGAAAATATTTGTTAATGAATTGTTCTCCCCCCACAAACATCAATGGCTCACAAACAAAAGGAACGAAGAAGCCGATAATCTCATGTTTTATGTCTACAACAAATGCAAAAATATGGATGATGATGATGATGTTCTTGTGAATGTTAGGATTGTTGCACGACATTTTTGTTGTAATTTGATGAGGAAATTGGTTTTCAATACAAGGTACTTTGGAGAAGGTAGTAATGATGGAGGTCCTGGTGTTGAGGAAGTGGAATATGTAGATGCCATTTTCACATTGCTTAGGTATGTTTTCGCCTTTTGTGTTTCTGACTATATGCCTTTGTTGAGGGGACTTGACATTGATGGTCATGAGAGAAAGGTGAAGGATGCTATGAGTATTGTGAACAAGTACAATGATCCAATCATTGAAAGGAGAATTGAAAAATCGAAAGATGGATCAAAGACTAGTGCTGATGCAGAGGACTTGCTTGATATTCTAATCTCTCTCAAAGATGCCAACAACAAACCATTATTGACATCAGATGAAATCAAGGCTCAAGCTATAGAACTTGTGCTGGGAGGAGTAGATAATCCATCACATGCAGCTGAATTTGCAATATCAGAAATGATAAATCAACCAGATTTACTTCAACGAGCCACTGAAGAATTGGACAATGTCGTAGGAAAACACAGACTAGTCCAAGAATCAGATATCCCAAAACTCAATTATGTGAAAGCTTGTGCTAGAGAAGCTTTTCGTCTTCATCCCATTACAATTTTTAATCCTCCCCATGTTGCTATGGACAACATAATGGTTGGTAATTACATGATCCCAAAAGGTAGCCATGTACTCCTAAGCAAACAAGGACTTGGTCGAAATCCAAAAGTTTGGAATGAACCTTACAAGTTTAAACCAGAACGACATTTAAAATATGACGGATCTATGGTAGTTTTGGCGGAACCAGATTTAAAATTCATATCATTTAGTACTGGAAGGCGCGGTTGTCCTGGAATTGTGCTTGGAACTACAATGACTATAATGTTATTGGGTAGATTGCTCCATGGCTTCAATTGGAGTGGACCTCCTAATGTATCAACCATTGATCTTCTCAAGTATTCTAATGGTGATAGATACCTTGGAGGCCCACTTATGGCAATGGCAAAGCCAAGATTGGCAGTCGAATTGTATCATCCATAA 1632 0.3799 MSYTPTFLLLLPRSFWPLFLVMFFLMVLISKKFMVIKTIRHFLIMNLNKVKLPPGPKPWPIVGNLPKMLANNSPTRWIHKVMEELNTEIACIRLGNVHVIPVTCPIIALEFIRKHDAAFASRPISMSTDIISKGFLTTAVTPFGGQWKKMKKIFVNELFSPHKHQWLTNKRNEEADNLMFYVYNKCKNMDDDDDVLVNVRIVARHFCCNLMRKLVFNTRYFGEGSNDGGPGVEEVEYVDAIFTLLRYVFAFCVSDYMPLLRGLDIDGHERKVKDAMSIVNKYNDPIIERRIEKSKDGSKTSADAEDLLDILISLKDANNKPLLTSDEIKAQAIELVLGGVDNPSHAAEFAISEMINQPDLLQRATEELDNVVGKHRLVQESDIPKLNYVKACAREAFRLHPITIFNPPHVAMDNIMVGNYMIPKGSHVLLSKQGLGRNPKVWNEPYKFKPERHLKYDGSMVVLAEPDLKFISFSTGRRGCPGIVLGTTMTIMLLGRLLHGFNWSGPPNVSTIDLLKYSNGDRYLGGPLMAMAKPRLAVELYHP 543
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre6g00735 543 FunFam Cytochrome P450 9 45 539 - -
Trre6g00735 543 SUPERFAMILY Cytochrome P450 51 535 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre6g00735 543 PRINTS E-class P450 group I signature 347 373 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre6g00735 543 PRINTS E-class P450 group I signature 480 503 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre6g00735 543 PRINTS E-class P450 group I signature 327 344 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre6g00735 543 PRINTS E-class P450 group I signature 107 128 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre6g00735 543 PRINTS E-class P450 group I signature 390 408 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre6g00735 543 PRINTS E-class P450 group I signature 470 480 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre6g00735 543 PRINTS E-class P450 group I signature 206 224 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre6g00735 543 PRINTS E-class P450 group I signature 431 455 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre6g00735 543 PANTHER CYTOCHROME P450 703A2-RELATED-RELATED 21 541 - -
Trre6g00735 543 Gene3D Cytochrome P450 43 518 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre6g00735 543 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 473 482 IPR017972 GO:0005506|GO:0016705
Trre6g00735 543 Pfam Cytochrome P450 53 511 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre6g00735 Trre-Chr6 5773589 5776252 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre6g00735 43 541 Cytochrome P450 AT2G22330 51.961 0.0 550
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre6g00735 - K14984 gmx:100809902 706.442