Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre6g00734 ATGGCCACGGATATCATTACCAAAGGTTTCTTGACAACTGCTCTTACACCCTTTGGAGGACAATGGAAAAAAATGAAGAAAATAATTGTGAATGAATTGCTATCCCCCCACCAACATCAATGGCTCAAAAACAAAAGGAACGAAGAAGCTGATGATCTAATGTTTTATGTCTACAACAAATGCAAAAATATAAATGATGATGGTCTTGTGAATGTTAGGATTGTTGCACAAAATTATTGTTATAATTTGATGAGGAAATTGATTTTTAATTCAAGGTATTTTGGAGAAGCTGAGGAAGTGGATCATGTAGATGCCGTTTTCACATTGCTTAAGTATATTTTTCTCTTTTGTGTTTCTGACTATATACCCTTGTTAAGAGGACTTGACATTGATGGTCATGAGAGAAAGGTGAAGGATGCTATGAGTATTGTGAACAAGTATAATGATCCAATCATTGAAAGGAGAATTGAAAAATGGAAAGATGGATCAAAGTCTAGTGCTGATGCAGAGGACTTGCTTGATATTCTAATCTCTCTCAAAGATGCAAACAACAAACCATTGTTGACATCAGATGAAATCAAGGCTCAAGCTCTAGAACTTGTCCTGGGAGGTGTGGATAATCCATCATGTGCAGCTGAATTTGCAATAGCAGAAATGATAAATCAACCGGATTTACTTCAACGAGCCATCGAAGAATTGGACAATGTCGTAGGAAAACAAAGACTGGTCCAAGAATCAGATATTCCAAACCTCAACTATGTGAAAGCTTGTGCAAGAGAAGCTTTTCGTCTTCATTCCGTTAGAATTTTTAATCTTCCCCATGTAGCTATGGACGACATAGAGGTTGGTATTTACATGATCCCAAAAGGTAGTCATGTACTTCTAAGCAAACAAGGACATCTAAAAAATGATGGGTCTATGGTCGTTTTGGCGGAACCAGATTTAAAGTTCATATCATTTAGTACCGGAAGGCGCGGTTGTCCTGGAAATGTGCTTGGAACCACAATGACTATAATGTTATTGGGTAGGTTGCTCCATGGCTTCAATTGGAGTGGACCTCCTAATGTATCAACCATTGATCTTCTCAAGTATTCTAATGGTGATAGATACCTTGGAGGGCCACTTGTGGCAATAGCAAAGCCAAGATTGGCGGTCGAATTGTATCACCCATAA 1173 0.3811 MATDIITKGFLTTALTPFGGQWKKMKKIIVNELLSPHQHQWLKNKRNEEADDLMFYVYNKCKNINDDGLVNVRIVAQNYCYNLMRKLIFNSRYFGEAEEVDHVDAVFTLLKYIFLFCVSDYIPLLRGLDIDGHERKVKDAMSIVNKYNDPIIERRIEKWKDGSKSSADAEDLLDILISLKDANNKPLLTSDEIKAQALELVLGGVDNPSCAAEFAIAEMINQPDLLQRAIEELDNVVGKQRLVQESDIPNLNYVKACAREAFRLHSVRIFNLPHVAMDDIEVGIYMIPKGSHVLLSKQGHLKNDGSMVVLAEPDLKFISFSTGRRGCPGNVLGTTMTIMLLGRLLHGFNWSGPPNVSTIDLLKYSNGDRYLGGPLVAIAKPRLAVELYHP 390
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre6g00734 390 PANTHER CYTOCHROME P450 703A2-RELATED-RELATED 2 388 - -
Trre6g00734 390 Pfam Cytochrome P450 314 358 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre6g00734 390 Pfam Cytochrome P450 19 302 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre6g00734 390 SUPERFAMILY Cytochrome P450 12 364 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre6g00734 390 PRINTS E-class P450 group I signature 327 350 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre6g00734 390 PRINTS E-class P450 group I signature 79 97 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre6g00734 390 PRINTS E-class P450 group I signature 192 209 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre6g00734 390 PRINTS E-class P450 group I signature 212 238 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre6g00734 390 PRINTS E-class P450 group I signature 317 327 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre6g00734 390 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 320 329 IPR017972 GO:0005506|GO:0016705
Trre6g00734 390 Gene3D Cytochrome P450 1 365 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre6g00734 Trre-Chr6 5754656 5756237 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre6g00734 2 388 Cytochrome P450 AT4G39950 48.309 5.50e-137 401
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre6g00734 - K14984 gmx:100809902 515.768