Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre6g00733 ATGCTTGCAAACAATTCTCCAACTAGATGGATACACAAAATAATGGAAGAAATGAATACCGAAATTGCATGTATCCGTCTAGGAAATGTCCACGTTATCCCGGTTAAATGTCCTGCCATTGCCCACGAATTCTTGAGAAAACATGATGCTGATTTTGCATCAAGACCGATAAGTGTGGTCAGTGATATTATCTCCAATGGCTACATGACCTCAATTCTTGCACCATACGGCGAACAATGGAGAAAGATGAAGAAAATTATTGCTAGAGATTTGTTCTCTCCACGGAGACATCAATGGCTTCAAGACAAACGGAACGAAGAAGCAGATAATCTTATGTTTTATGTGCACAACAAATGCAACAATGGTGGCCTTGTGAATGTTAGGATTGCTACTCAACATTATTGTGGCAATGTGTATAGGAAATTTTTTTTTAATAGAAGGTACTTTGGAAAAGGTATGAAGGATGGAGGACCTGGTGTTGAGGAAGTTGAACATGTTGATGCTGTTTTCATATTGCTTAACTATGTTTTTGCTTTCTCTACATCTGATTATATTCCATGGTTGAGGTTACTAGACTTAGATGGCCATAAGGGCAAGGTAAAAAATGCAATGAGGATAATGAACAAGTATCATGATTCCATCATTGATGAGAGAATCAAAGAATGGAATAATGGATTAAAGAATGTTGAAGAGGACTTGCTAGATGTTTTGATCTCCCTCAAAGATGTCAACAATAATCCATTATTGACAACAAAAGAAATCAAGGCACAAGTTATTGAATTGATGATGGCAATGGTAGACAATCCGTCAAACGCAGTTGAATGGACATTAGCTGAAATGATAAATCAACCTGAGTTACTACAACGAGCCACTGAGGAATTGGATAACGTTGTTGGTAAACAAAGACTAGTTCAAGAATCAGATATTCCAAATCTCAACTATGTGAAAGCTTGTGCAAGAGAAGCTTTTCGCCTTCATCCAATAACAGCTTTCAATGTTCCCCATGTCTCTATGAATGATACAATAGTTGGAAATTATTTGATACCAAAGGGTAGCCATATATTGCTTGGAAGAAGTGGTCTTGGGAGAAACCCAAAAGTTTGGAGTGAACCTTACAAATTCAAACCAGAACGTCATCTCAAGAATGATGGGTCTAATATAACTTTGACAGAGCCAGATTTGAAATTCATATCTTTTAGTACCGGAAGGCGCGGTTGTCCGGGTGTCATGCTTGGCTCGACAATGACTATATTGTTATTAGCTAGGTTGCTCCATGGCTTCACTTGGAGTGCACCTTCTGATATATCAAGAATTAATTGTGTCGAGTCAAATAGTGTTATGTTTCTTGATGAGCCACTTACGGTTGTAGCAAAGCCACGATTAGCAGTGGAATTGTACAACTTTTCAAGTAAAGCTAAGGAAGCTAAATAA 1431 0.3781 MLANNSPTRWIHKIMEEMNTEIACIRLGNVHVIPVKCPAIAHEFLRKHDADFASRPISVVSDIISNGYMTSILAPYGEQWRKMKKIIARDLFSPRRHQWLQDKRNEEADNLMFYVHNKCNNGGLVNVRIATQHYCGNVYRKFFFNRRYFGKGMKDGGPGVEEVEHVDAVFILLNYVFAFSTSDYIPWLRLLDLDGHKGKVKNAMRIMNKYHDSIIDERIKEWNNGLKNVEEDLLDVLISLKDVNNNPLLTTKEIKAQVIELMMAMVDNPSNAVEWTLAEMINQPELLQRATEELDNVVGKQRLVQESDIPNLNYVKACAREAFRLHPITAFNVPHVSMNDTIVGNYLIPKGSHILLGRSGLGRNPKVWSEPYKFKPERHLKNDGSNITLTEPDLKFISFSTGRRGCPGVMLGSTMTILLLARLLHGFTWSAPSDISRINCVESNSVMFLDEPLTVVAKPRLAVELYNFSSKAKEAK 476
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre6g00733 476 PANTHER CYTOCHROME P450 98A9 5 467 - -
Trre6g00733 476 PRINTS E-class P450 group I signature 40 61 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre6g00733 476 PRINTS E-class P450 group I signature 396 406 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre6g00733 476 PRINTS E-class P450 group I signature 406 429 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre6g00733 476 PRINTS E-class P450 group I signature 273 299 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre6g00733 476 PRINTS E-class P450 group I signature 316 334 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre6g00733 476 PRINTS E-class P450 group I signature 253 270 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre6g00733 476 PRINTS E-class P450 group I signature 357 381 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre6g00733 476 FunFam Cytochrome P450 9 1 464 - -
Trre6g00733 476 CDD CYP79 20 461 - -
Trre6g00733 476 SUPERFAMILY Cytochrome P450 5 460 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre6g00733 476 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 399 408 IPR017972 GO:0005506|GO:0016705
Trre6g00733 476 Gene3D Cytochrome P450 1 467 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre6g00733 476 Pfam Cytochrome P450 16 452 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre6g00733 Trre-Chr6 5746115 5748141 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre6g00733 1 466 Cytochrome P450 AT4G39950 55.675 0.0 558