Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre6g00732 ATGAGTTACACTACTTGTTTTCTTTGGTTACTCCCTCAGTCCTTTTGGCCTCTTTTCCTTGTTATATATTTTTTCTTTATAGTAATCAAAACCATAAGATGCAAGAACCCTAACAAATATAAACTGCCACCAGGTCCCAAACCATGGCCAATAGTTGGTAATCTTCCTGAAATGCTTGCAAACAATTCTCCAACTAGATGGATACACAAAATAATGGAAGAAATGAATACCGAAATTGCATGTATCCGTCTAGGAAATGTCCACGTTATCCCGGTTAAATGTCCTGCCATTGCCCACGAATTCTTGAGAAAACATGATGCTGATTTTGCATCAAGACCGATAAGTGTGGTCAGTGATATTATCTCCAATGGCTACATGACCTCAATTCTTGCACCATACGGCGAACAATGGAGAAAGATGAAGAAAATTATTGCTAGAGATTTGTTCTCTCCACGGAGACATCAATGGCTTCAAGACAAACGGAACGAAGAAGCAGATAATCTTATGTTTTATGTGCACAACAAATGCAACAATGGTGGCCTTGTGAATGTTAGGATTGCTACTCAACATTATTGTGGCAATGTGTATAGGAAATTTTTTTTTAATAGAAGGTACTTTGGAAAAGGTATGAAGGATGGAGGACCTGGTGTTGAGGAAGTTGAACATGTTGATGCTGTTTTCATATTGCTTAACTATGTTTTTGCTTTCTCTACATCTGATTATATTCCATGGTTGAGGTTACTAGACTTAGATGGCCATAAGGGCAAGGTAAAAAATGCAATGAGGATAATGAACAAGTATCATGATTCCATCATTGATGAGAGAATCAAAGAATGGAATAATGGATTAAAGAATGTTGAAGAGGACTTGCTAGATGTTTTGATCTCCCTCAAAGATGTCAACAATAATCCATTATTGACAACAAAAGAAATCAAGGCACAAGTTATTGAATTGATGATGGCAATGGTAGACAATCCGTCAAACGCAGTTGAATGGACATTAGCTGAAATGATAAATCAACCTGAGTTACTACAACGAGCCACTGAGGAATTGGATAACGTTGTTGGTAAACAAAGACTAGTTCAAGAATCAGATATTCCAAATCTCAACTATGTGAAAGCTTGTGCAAGAGAAGCTTTTCGCCTTCATCCAATAACAGCTTTCAATGTTCCCCATGTCTCTATGAATGATACAATAGTTGGAAATTATTTGATACCAAAGGGTAGCCATATATTGCTTGGAAGAAGTGGTCTTGGGAGAAACCCAAAAGTTTGGAGTGAACCTTACAAATTCAAACCAGAACGTCATCTCAAGAATGATGGGTCTAATATAACTTTGACAGAGCCAGATTTGAAATTCATATCTTTTAGTACCGGAAGGCGCGGTTGTCCGGGTGTCATGCTTGGCTCGACAATGACTATATTGTTATTAGCTAGGTTGCTCCATGGCTTCACTTGGAGTGCACCTTCTGATATATCAAGAATTAATTGTGTCGAGTCAAATAGTGTTATGTTTCTTGATGAGCCACTTACGGTTGTAGCAAAGCCACGATTAGCAGTGGAATTGTACAACTTTTCAAGTAAAGCTAAGGAAGCTAAATAA 1602 0.3764 MSYTTCFLWLLPQSFWPLFLVIYFFFIVIKTIRCKNPNKYKLPPGPKPWPIVGNLPEMLANNSPTRWIHKIMEEMNTEIACIRLGNVHVIPVKCPAIAHEFLRKHDADFASRPISVVSDIISNGYMTSILAPYGEQWRKMKKIIARDLFSPRRHQWLQDKRNEEADNLMFYVHNKCNNGGLVNVRIATQHYCGNVYRKFFFNRRYFGKGMKDGGPGVEEVEHVDAVFILLNYVFAFSTSDYIPWLRLLDLDGHKGKVKNAMRIMNKYHDSIIDERIKEWNNGLKNVEEDLLDVLISLKDVNNNPLLTTKEIKAQVIELMMAMVDNPSNAVEWTLAEMINQPELLQRATEELDNVVGKQRLVQESDIPNLNYVKACAREAFRLHPITAFNVPHVSMNDTIVGNYLIPKGSHILLGRSGLGRNPKVWSEPYKFKPERHLKNDGSNITLTEPDLKFISFSTGRRGCPGVMLGSTMTILLLARLLHGFTWSAPSDISRINCVESNSVMFLDEPLTVVAKPRLAVELYNFSSKAKEAK 533
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre6g00732 533 PRINTS E-class P450 group I signature 310 327 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre6g00732 533 PRINTS E-class P450 group I signature 453 463 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre6g00732 533 PRINTS E-class P450 group I signature 97 118 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre6g00732 533 PRINTS E-class P450 group I signature 330 356 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre6g00732 533 PRINTS E-class P450 group I signature 414 438 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre6g00732 533 PRINTS E-class P450 group I signature 463 486 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre6g00732 533 PRINTS E-class P450 group I signature 373 391 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre6g00732 533 CDD CYP79 77 518 - -
Trre6g00732 533 PANTHER CYTOCHROME P450 98A9 21 524 - -
Trre6g00732 533 SUPERFAMILY Cytochrome P450 38 517 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre6g00732 533 Gene3D Cytochrome P450 35 524 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre6g00732 533 Pfam Cytochrome P450 43 509 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre6g00732 533 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 456 465 IPR017972 GO:0005506|GO:0016705
Trre6g00732 533 FunFam Cytochrome P450 9 35 521 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre6g00732 Trre-Chr6 5746115 5748312 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre6g00732 2 523 Cytochrome P450 AT4G39950 53.524 0.0 588
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre6g00732 - K12153 gmx:100787378 745.347