Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre6g00711 ATGAAGGCCAACAAAGTTTCCTCTAAATTTATGTTCATGAAGTTCTATTCTGTTTCGGTGGTTTCTTTCCTTTTTGTCGTTGCTATTTTGTTACCGCTTGCTATTGGTGCCGACCTTAGTTCCGATAAGCAAGCCCTTCTTGATTTTATCAATGCTGTGCCACACCGTCGAAATCTGATGTGGGATCCCTCCACCTCAATCTGTACGTCTTGGGTTGGCATCACTTGCAATCAAAATGGAACTCGAGTTGTTACTGTCCGACTCCCAGGAGTCGGACTAGTTGGCTCCATTCCACCCAATACACTCGGAAAGCTTGATGCCGTGAAGATTATTAGCCTTCGTTCCAACCTACTCGGTGGAAATCTTCCTACTGACATTGCTTCTCTTCTGTCTCTTCAGTATCTCTACCTCCAGCGTAATAACTTTTCCGGTGATATTCCTACCTCATTGTCGCCCCAACTAGTTGTACTTGATTTGTCTTATAATTCTTTCTCCGGTAGAATTCCAAAGTCATTACAAAATTTGACAGGACTAAATAGTTTGAATCTCCAAAATAACTCACTGTCGGGAACCATACCTAATCTCAATATTACAAAGCCCGGTAATTTGAATTTAAGCTACAACAATTTGAGTGGACCTATCCCTTCGTCCCTCAGTGTTTATCCTAATTCATCGTTTGAAGGAAACTCTGGTTTATGTGGACCGCCTCTAAAGTCATGCTCTACGATTCCATCTACACCTTCTCCTGCCTCGGCTCCTATTCCATCTGTTAAACGAAGCTCCAAAAATAAATTAAGTAAGATAGCTATCATTGCCATTGCGGTTGGAGGAGCCATGCTGCTATTTTTTGTAGCTCTTGTTATTGTTTTCTGCTGTTTGAAGAAGGACAATGACGAAAGCTCCAGAGAAATTAAAGGAAAGGGTCCTGGTGGCGGCGGCGGTGGCGGTGGTAGGGGTGATAAGCCGAAAGAAGAGTTTGGGAGTGGAGTGCAAGAACATGAGAAGAACAAGTTGGTTTTCTTTGAAGGAAGTTCTTATAATTTTGATCTCGAAGATTTGCTTAGAGCTTCAGCTGAAGTTCTTGGAAAAGGTAGTTATGGTACCTCGTATAAGGCTATATTGGAGGAAGCAATGACAGTTGTTGTGAAGAGGTTGAAAGAAGTTGTGGTAGGCAAAAAGGAGTTTGAACAACAGATGGAGATTATGGGAAGGGTTGGACAACACGCGAACGTTGTACCGCTTCGCGCTTATTATTATTCGAAAGATGAAAAGCTTATGGTTTATGACTATATCCCAGCTGGCAACTTATCCACACTCTTGCATGGAAGTCGATCAGGTGGAAGAACTCCATTAGATTGGGACTCGAGAGTAAAAATATCTCTTGGAACTGCAAGAGGACTTGCGCACATCCATTCTGTCGGAGGTACCAAATTCACACATGGAAATATTAAGTCCTCAAATGTCCTCATCAACCAAGATAACGACGGCTGCATTTCTGATTTCGGTCTGACCTCACTTATGAATGTTCCTGCAAACCCTTCTAGAGCTGCAGGATATCGCGCACCTGAGGTGATTGAAACCCGTAAGCACTCTCATAAATCAGATGTCTACAGCTTTGGTGTACTCCTTCTCGAACTGCTTACAGGTAAAGCGCCTCTCCAATCTCCTGGACGCGACGATATGGTTGATCTCCCTAGGTGGGTTCAGTCTGTCGTTCGGGAGGAGTGGACAGCCGAGGTTTTTGATGTTGAACTAATGAGGTACCAAAACATCGAAGAAGAAATGGTGCAAATGTTACAAATTGCCATGGCTTGTGTAGCAAAAGTGCCTGATATGAGACCTAACATGATAGAAGTGGTGAGATTGATCGAAGAGATCCGGCTATCTGACTCAGAGAACCGACCATCTTCCGAAGAGAATAAATCTAAGGACTCAAATGTTCAGACTCCATAG 1953 0.4327 MKANKVSSKFMFMKFYSVSVVSFLFVVAILLPLAIGADLSSDKQALLDFINAVPHRRNLMWDPSTSICTSWVGITCNQNGTRVVTVRLPGVGLVGSIPPNTLGKLDAVKIISLRSNLLGGNLPTDIASLLSLQYLYLQRNNFSGDIPTSLSPQLVVLDLSYNSFSGRIPKSLQNLTGLNSLNLQNNSLSGTIPNLNITKPGNLNLSYNNLSGPIPSSLSVYPNSSFEGNSGLCGPPLKSCSTIPSTPSPASAPIPSVKRSSKNKLSKIAIIAIAVGGAMLLFFVALVIVFCCLKKDNDESSREIKGKGPGGGGGGGGRGDKPKEEFGSGVQEHEKNKLVFFEGSSYNFDLEDLLRASAEVLGKGSYGTSYKAILEEAMTVVVKRLKEVVVGKKEFEQQMEIMGRVGQHANVVPLRAYYYSKDEKLMVYDYIPAGNLSTLLHGSRSGGRTPLDWDSRVKISLGTARGLAHIHSVGGTKFTHGNIKSSNVLINQDNDGCISDFGLTSLMNVPANPSRAAGYRAPEVIETRKHSHKSDVYSFGVLLLELLTGKAPLQSPGRDDMVDLPRWVQSVVREEWTAEVFDVELMRYQNIEEEMVQMLQIAMACVAKVPDMRPNMIEVVRLIEEIRLSDSENRPSSEENKSKDSNVQTP 650
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre6g00711 650 PANTHER OS05G0588300 PROTEIN 23 638 - -
Trre6g00711 650 FunFam Leucine-rich repeat receptor-like protein kinase 152 240 - -
Trre6g00711 650 Gene3D Phosphorylase Kinase; domain 1 323 430 - -
Trre6g00711 650 Gene3D Ribonuclease Inhibitor 197 241 IPR032675 -
Trre6g00711 650 SUPERFAMILY Protein kinase-like (PK-like) 359 632 IPR011009 -
Trre6g00711 650 Pfam Leucine rich repeat N-terminal domain 40 77 IPR013210 -
Trre6g00711 650 FunFam protein STRUBBELIG-RECEPTOR FAMILY 8 431 638 - -
Trre6g00711 650 FunFam Leucine-rich repeat receptor-like protein kinase 41 151 - -
Trre6g00711 650 MobiDBLite consensus disorder prediction 299 328 - -
Trre6g00711 650 MobiDBLite consensus disorder prediction 630 650 - -
Trre6g00711 650 Gene3D Ribonuclease Inhibitor 39 196 IPR032675 -
Trre6g00711 650 FunFam pollen receptor-like kinase 1 323 430 - -
Trre6g00711 650 Gene3D Transferase(Phosphotransferase) domain 1 431 649 - -
Trre6g00711 650 Pfam Protein kinase domain 358 620 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre6g00711 650 ProSiteProfiles Protein kinase domain profile. 355 628 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre6g00711 650 SUPERFAMILY L domain-like 41 237 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre6g00711 Trre-Chr6 5599305 5601625 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre6g00711 15 648 Receptor kinase-like Gene Family AT5G58300 65.265 0.0 822
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Trre6g00711 Pkinase 1.5e-37 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre6g00711 - - gmx:100796171 1015.37