Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre6g00697 ATGAAGCTCCAATTTGATTCACAGTTTTTCATATCCATTTTGTTTATTGGTTTTGTAGCACTGCTGTTTCATTTATTCACTATTTTTGTGCAGAAGCCAAATGTGCTTCGTTCTAAGCTAAAGAAACAAGGTATAAATGGTCCACCTCCAACTATACTTCTTGGAAATCTAATGGAAATAATGAAATCTCAGATTACCACTCCAATTTCTCATTCTTTTATCACTCACAACACTGCTTCTCTTGTCTTTCCCAAATTTGAAGAATGGAGGAAACAATATGGTGAAGTGTTCATGTTTTCTTTTGGAAATATTCAATCATTGTGTGTGAGCCAAACTGATATGATAAAGGAATTCACCACATGCACTTCTTTTGACTTGGGATTACCTCCATTTCACAAGAAACTTTTTAGGCCTTTGTTAGGTGATGGTATTTTAACCTCAAATGGGACTACATGGGCTCATCATAGAAAGATCTTAGCTCCAGAATTATACATGGATAAAGTTAAGGGAATGGTGAATATTGTTAGTGAGTCTTGTGAATCTCTGCTAAACTTATGGAATAGTAAAATAGAGGCTCAAAATGGAGGAGTTGCTGATATAAATATTGATGAGGGATTGAAAATATTCTCTGCTAATGTTATTTCAAGAGCATGCTTTGGAAGTGATTATTCCAAGGGGGAAGAAATATTCTTGAAACTTGGAGCTCTCCAAGAAGTTGGTTTTAACTGGAAAAATCTCTCTTCAGTAGTACCTGGCATGAGATACCTTCCAACAAAGAGCAACAGAAAATCATGGATATTAGCAAAGGAAGTGCAAAGTTTGATACTTGAAGTGGTGAAGGAAAGAAAGGAAAAAACTAGTTTTGAAAAGGACTTGCTTCAAATGGTTATTGAAGATGCCAAGAAAACTAATCTCACACAAGAGGCCAGTGATCGTTTTATTATTGATAACTGCAAGAATATATACTTGGCTGCCTCTGAATCAACTGCAGTTGTTGCTTCATGGTGTCTTATGTTATTGGCCTCAAACCAAAATTGGCAAGACCGCGCTCGTGCCGAGGTACTAGAAATTTGCAGAGGTGGAATCCTAGATTATGATATGCTTTCAAAGATGAAACAGCTTACAATGATTATTCATGAAACTTTGCGCCTTTATCCACCTGCACCTTTATTGCTAAGGCATGCTTTCAAGGATATGAAATTCGGGAATATCGATATCCCAGAGGGCACTGGCCTTTGGATATTGATAATAAGTTTGCATACAAATCCTGATATATGGGGAGATGATGCTGACAAATTCAATCCAGAAAGATTTGCTAATGGAGTTGCAGGTGCTTGTAAGCATCCACATGTGTATATGCCATTTGGAGTTGGCCCAAGAATTTGTCTTGGACAAAACTTGGCCATGCTTGAACTTAAGATGCTCATAGCTCTCATTTTGTCCAATTTCTGTTTCTCCCTTTCTCCTCGATACATACATTCACCTGCACTCGGAATTACAATGAAACCTGACCACGGAGTCCAGCTCCTAGTAAGAAAGCTGTGA 1545 0.3754 MKLQFDSQFFISILFIGFVALLFHLFTIFVQKPNVLRSKLKKQGINGPPPTILLGNLMEIMKSQITTPISHSFITHNTASLVFPKFEEWRKQYGEVFMFSFGNIQSLCVSQTDMIKEFTTCTSFDLGLPPFHKKLFRPLLGDGILTSNGTTWAHHRKILAPELYMDKVKGMVNIVSESCESLLNLWNSKIEAQNGGVADINIDEGLKIFSANVISRACFGSDYSKGEEIFLKLGALQEVGFNWKNLSSVVPGMRYLPTKSNRKSWILAKEVQSLILEVVKERKEKTSFEKDLLQMVIEDAKKTNLTQEASDRFIIDNCKNIYLAASESTAVVASWCLMLLASNQNWQDRARAEVLEICRGGILDYDMLSKMKQLTMIIHETLRLYPPAPLLLRHAFKDMKFGNIDIPEGTGLWILIISLHTNPDIWGDDADKFNPERFANGVAGACKHPHVYMPFGVGPRICLGQNLAMLELKMLIALILSNFCFSLSPRYIHSPALGITMKPDHGVQLLVRKL 514
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre6g00697 514 PRINTS P450 superfamily signature 453 462 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre6g00697 514 PRINTS P450 superfamily signature 462 473 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre6g00697 514 PRINTS P450 superfamily signature 376 387 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre6g00697 514 PRINTS P450 superfamily signature 324 341 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre6g00697 514 PANTHER CYTOCHROME P450 FAMILY MEMBER 36 506 - -
Trre6g00697 514 SUPERFAMILY Cytochrome P450 47 512 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre6g00697 514 Pfam Cytochrome P450 83 489 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre6g00697 514 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 455 464 IPR017972 GO:0005506|GO:0016705
Trre6g00697 514 Gene3D Cytochrome P450 33 514 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre6g00697 514 PRINTS E-class P450 group I signature 462 485 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre6g00697 514 PRINTS E-class P450 group I signature 90 109 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre6g00697 514 PRINTS E-class P450 group I signature 452 462 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre6g00697 514 PRINTS E-class P450 group I signature 313 330 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre6g00697 514 PRINTS E-class P450 group I signature 375 393 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre6g00697 514 PRINTS E-class P450 group I signature 333 359 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre6g00697 514 PRINTS E-class P450 group I signature 416 440 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre6g00697 514 PRINTS E-class P450 group I signature 209 227 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre6g00697 Trre-Chr6 5387886 5390145 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre6g00697 114 511 Cytochrome P450 AT5G24900 43.902 4.57e-121 359
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre6g00697 K24544 - gmx:100785420 734.947