Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre6g00696 ATGAAGATCCAATTTGATTTGCAGTTTATCACATCCATTGTGTTTATTGGTTTTGTAGCACTGTTGTTTCGTTTGTACACTAGTTTGGTGCATAAGCCAAACGTGGTTCGTTCTAAGCTAAAGAAACAAGGTATAAGTGGTCCACCTCCAACTATACTTCTTGGAAATCTAATGGAAATAATGAAATCTCAGCCCTCAATTCCAAATTCTCCTTGTTCTGAACCCCCTCTTAGTCACAACACTGCTTCTCTTCTCTTTCCTAAATTTGAAGAATGGAGGGAACAATACGGTAAATTGTTCATGATTTCTTTTGGAAACATACCAACATTGTGTGTGAGCCAAACAGAGATAGTGAAAGAAATCACTACAAGCACTTCTTTCAACTTGGGGAAGAATTCATTTACAAAGAGACTACTTGAGTCTTACTTTGGTGATGGTATTATAACATCAAATGGGACTACATGGGCCCATCATAGAAAGATCTTAGCTCCACAATTATACATCGATAAGGTTAAGGGAATGGTGAATATTGTTAGTGAGTCTTGTGAATCTCTGATAAACTTATGGAGTAGTAAAATAGAGGCACAATGTGGAGTTGCAGATATAAATATTGATGAAGACATAAAAAGATTCTCTGGGAATGTTATTTCAAGAACATGCTTTGGAAGTGATTATTATAAAGGAGAAAAACTTTTCTTGAATTTTGAAGCTCTCCAAGAAGTTGCTGGTTCCTGGAAAAATCTATTTTTAGCTTTTCCTGGCATGAGATATCTTCCAACAAAGTCCAATAGAAAAACATGGATACTAAAAAAGGAGGTGAAAAATTTGATACTTGAAATGGTGAAGGAAAAAAAAGAAAAAACTAGTTTGGAAAATGACTTGCTGCAAATGGTTATTGAAGATGCAAAGAAAAGTAATCTCACAAAAGAGGCCAGTGACCGTTTTATTATTGATAGCTTCAAGAATATATACTTTGCAGGCTTTGAAACAACTGCAGTTGCTGCTACATGGTGTCTTATGTTGTTGGCCTCAAATCAAAATTGGCAAGATCGTGCTCGTGCTGAGGTACTACAAATTTGCAGCGGTAGCAACCCTGATTTTGATATGCTTTCAAAGATGAAGCTGTTGACAATGGTTATTCAAGAATCTTTGCGCCTTTATCCTCCTACGCCTTTATTGTCAAGGAAAACTTTCAAGGACATGAAATTTGGGAATATTGATGTGCCAAAAGGCACTGATCTTTGGATATTTATGATAACTATGCATACAAATCCTAATATATGGGGAGATGATGCCTACAAATTTAATCCAGAAAGATTTGCCAATGGAACCGTAGGTGCTTGTAAGCATCCGCACGTGTATATGCCATTTGGAGTTGGCCCAAGAGTTTGTCTTGGACAGAACTTAGCCATGCTTGAACTTAAGATGCTCTTAGCTCTCATTTTGTCCAACTTCTCTTTCTCCCTCTCTCCTGGATACATACATTCACCTGCATATGGGATTATAATGAAGCCTAACAATGGAGTCCAGCTTCTAGTTAGAAAACTATAA 1551 0.3675 MKIQFDLQFITSIVFIGFVALLFRLYTSLVHKPNVVRSKLKKQGISGPPPTILLGNLMEIMKSQPSIPNSPCSEPPLSHNTASLLFPKFEEWREQYGKLFMISFGNIPTLCVSQTEIVKEITTSTSFNLGKNSFTKRLLESYFGDGIITSNGTTWAHHRKILAPQLYIDKVKGMVNIVSESCESLINLWSSKIEAQCGVADINIDEDIKRFSGNVISRTCFGSDYYKGEKLFLNFEALQEVAGSWKNLFLAFPGMRYLPTKSNRKTWILKKEVKNLILEMVKEKKEKTSLENDLLQMVIEDAKKSNLTKEASDRFIIDSFKNIYFAGFETTAVAATWCLMLLASNQNWQDRARAEVLQICSGSNPDFDMLSKMKLLTMVIQESLRLYPPTPLLSRKTFKDMKFGNIDVPKGTDLWIFMITMHTNPNIWGDDAYKFNPERFANGTVGACKHPHVYMPFGVGPRVCLGQNLAMLELKMLLALILSNFSFSLSPGYIHSPAYGIIMKPNNGVQLLVRKL 516
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre6g00696 516 Pfam Cytochrome P450 87 493 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre6g00696 516 Gene3D Cytochrome P450 34 516 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre6g00696 516 PRINTS E-class P450 group I signature 315 332 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre6g00696 516 PRINTS E-class P450 group I signature 335 361 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre6g00696 516 PRINTS E-class P450 group I signature 464 487 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre6g00696 516 PRINTS E-class P450 group I signature 454 464 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre6g00696 516 PRINTS E-class P450 group I signature 93 112 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre6g00696 516 PRINTS E-class P450 group I signature 211 229 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre6g00696 516 PRINTS E-class P450 group I signature 377 395 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre6g00696 516 SUPERFAMILY Cytochrome P450 79 514 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre6g00696 516 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 457 466 IPR017972 GO:0005506|GO:0016705
Trre6g00696 516 PANTHER CYTOCHROME P450 FAMILY MEMBER 33 503 - -
Trre6g00696 516 Coils Coil 273 293 - -
Trre6g00696 516 PRINTS P450 superfamily signature 378 389 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre6g00696 516 PRINTS P450 superfamily signature 455 464 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre6g00696 516 PRINTS P450 superfamily signature 326 343 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre6g00696 516 PRINTS P450 superfamily signature 464 475 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre6g00696 Trre-Chr6 5382941 5385703 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre6g00696 117 513 Cytochrome P450 AT5G24900 41.363 1.72e-113 340
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre6g00696 K24544 - gmx:100785420 706.827