Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre6g00633 ATGGCACCTGTTTCATTGCCTCCTGGATTTAGGTTCCACCCTACCGATGAAGAACTTGTTTCTTATTACCTCAAAAGAAAGATTAATGGCCGTAGGATTGAGTTGGAGATCATCCCTGAAGTTGATCTCTACAAGTGTGAACCATGGGACTTGCCAGGAAAGTCATTGCTACCGGGAAAAGATTTGGAATGGTATTTTTTCAGCCCACGGGACAGGAAGTACCCCAATGGGTCAAGAACCAATAGAGCAACAAAATCTGGATATTGGAAGGCAACAGGGAAAGATCGTAAGGTGAATTCTCAAACTCGAGCAGTTGGTATGAAGAAAACCCTAGTTTACTATAGAGGAAGAGCACCACATGGATCTCGTACCGGTTGGGTTATGCATGAATACCGTCTTGATGAAAGAGAATGTGACAATCCTTCTTCAGGCTTGCAGGATGCATATGCTCTTTGCCGTATATTCAAGAAGAGTACAGTGATAGTCCCAAAAGTTGGGGAGCAATATGTTAATAATGTGACAAGGCATGCAAATCATATTACAAGTGATCAACAATCATCAAGCATTGAGTTATACTCTGAAGGAGGAAGAGATGAAATCTTAGAGAGCTCAAATTATTTGATGCCATGGGATGCAAACTCAACCCAAAACATAAATGGGAATAATACTTTCAATAACAATGGTGGAATGGCAAGGGACAATGGAATTTGGACACAATTCTTATCGGAAGACTTGCTCAATCTTCCAACATCTTCCTCATCATTTCCCAATTATGCATCCACACCTAATTACCCTCCATCCAAGGTGGATATAGCACTAGAATGTGCAAGAATGCAACATAGGTTTTCCATGCCACCCTTGGAGATGGAAGACTTTCCTCAAGTTGGTTTTAATTCTGAGCTGAAAATGACACAATTAGCCTCAAGTTCCATGTGTGGAACTAGAAATGAAACAGATATCTTGCAGGAAATTCTATCTGTTGCTCAAGCTTCCCAAGAATTGATAAATCAATCAAACTACTCACATGCATTTGGTGGTAGTGAAAACTATGCAACTCATCATGAAAATGATTTTACTTTTATGGTTGGAAATAATAATTACAATGTGAATGATCATATGAACTCCATGAGATATGATGACAAAGCATGGGAAGATCCAAACATGAGATCAATAGAGATTGGAGATCTTGATGATGAATTCAAGGCTGAAAGGATGGTAGAGAATTTAAGATGGGTTGGAATGTCAAGCAATGATTTAGAGAAGAGTTTTATGGAAGAGCATCAAAAGGTTGTTCCAATTGAGGAAATTTCAAGCTTCCAAACAAACAGGAAAGAGAATGAGGTGCAAGTAGAATCTGAGCAACAAAATATCAACAAAGAAATCAATGACACTGACATTGGTAATTTCTCAATGGAATTTATCAATAATAATGATGACCCAAATGAGAATTTTATAGATGATAGTAACATTGATTATTCAAATTCTACAAGCTATGAAGTTGTTGAGGAAACAACAAAAGTTAGTCATGGAATGTTTGTTGCTACACGACAAGTAGCTGACACATTTTTTCACCAAATAACACCTTCACAAACAATCAAAGTTCAGCTCAATCCAATTATGGAAAACAAAAAATCTATAGAGAATGAAGTAACATTGGTTATACCAAAGAAACAAGGGTACTCTTTCCTAAGGAAGTTTAAGGCCAATTTGATGGATTACATGAAAAAGCCATCAAAGACAATAGCAAGTGCTATTGTGTTTATGTTTGCACTTTTTTTGGTGCTTTGTGTTTATTTGAAGGAGCAAGTGGAAGATATGAAACCAAAGTCAAAGTATGTGGAAAGGAAATATTGCTATGGAGCTAATAGCATGAAGAAAATCATTTGGAAGGAGCAAGAAAAAATTTGGTTTGTTGGTATCAAAAGTGGTAAAGGTTTTGATGTGGTCTTGAAGAAGATAGGAATTTTCCTCACTATATCTTTGGCTCTTTGTACTATGTGGGCTAACCATATGATAGTTTGTGCTTGA 2028 0.3708 MAPVSLPPGFRFHPTDEELVSYYLKRKINGRRIELEIIPEVDLYKCEPWDLPGKSLLPGKDLEWYFFSPRDRKYPNGSRTNRATKSGYWKATGKDRKVNSQTRAVGMKKTLVYYRGRAPHGSRTGWVMHEYRLDERECDNPSSGLQDAYALCRIFKKSTVIVPKVGEQYVNNVTRHANHITSDQQSSSIELYSEGGRDEILESSNYLMPWDANSTQNINGNNTFNNNGGMARDNGIWTQFLSEDLLNLPTSSSSFPNYASTPNYPPSKVDIALECARMQHRFSMPPLEMEDFPQVGFNSELKMTQLASSSMCGTRNETDILQEILSVAQASQELINQSNYSHAFGGSENYATHHENDFTFMVGNNNYNVNDHMNSMRYDDKAWEDPNMRSIEIGDLDDEFKAERMVENLRWVGMSSNDLEKSFMEEHQKVVPIEEISSFQTNRKENEVQVESEQQNINKEINDTDIGNFSMEFINNNDDPNENFIDDSNIDYSNSTSYEVVEETTKVSHGMFVATRQVADTFFHQITPSQTIKVQLNPIMENKKSIENEVTLVIPKKQGYSFLRKFKANLMDYMKKPSKTIASAIVFMFALFLVLCVYLKEQVEDMKPKSKYVERKYCYGANSMKKIIWKEQEKIWFVGIKSGKGFDVVLKKIGIFLTISLALCTMWANHMIVCA 675
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre6g00633 675 SUPERFAMILY NAC domain 4 157 IPR036093 GO:0003677|GO:0006355
Trre6g00633 675 FunFam Nac domain-containing protein 86 15 160 - -
Trre6g00633 675 Gene3D NAC domain 15 161 IPR036093 GO:0003677|GO:0006355
Trre6g00633 675 Pfam No apical meristem (NAM) protein 7 133 IPR003441 GO:0003677|GO:0006355
Trre6g00633 675 ProSiteProfiles NAC domain profile. 6 157 IPR003441 GO:0003677|GO:0006355
Trre6g00633 675 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 5 303 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre6g00633 Trre-Chr6 4827312 4831781 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre6g00633 1 666 NAC Transcription Factor Family AT1G65910 44.331 1.25e-162 480
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Trre6g00633 NAM 7.6e-41 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre6g00633 - - gsj:114381841 949.118