Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre6g00576 ATGTTTGGTTTGATGTCATTAGCGGTGGAACCATTGGGGAGATTGGTCGGAGGTGCAAAGAGGCTTTGTGAGGGTGTCAATAACATTCTTGCTATTGTACTAGCAATGACGATGCTGGTCACCAAGGTAGCCAAACAGGAAGGCCACGTCGGAGCGCCTTCTATAGGAGTTAAGGCAGTCACTATGATTATCTTTATATCTCTATTTCTTGTTGCAATGAAAGTTGATGCTAATCATTGTTATCAAGAATCTGATTGTGTACATATGTTAAGAGATATGTGCTTTCCTCCTCGCAAACCAATATGTAAGTACTATGAATCGGTGCCTAAGTCCCTTGGTGGCAAATGTATTTGTATAGATTAA 363 0.4077 MFGLMSLAVEPLGRLVGGAKRLCEGVNNILAIVLAMTMLVTKVAKQEGHVGAPSIGVKAVTMIIFISLFLVAMKVDANHCYQESDCVHMLRDMCFPPRKPICKYYESVPKSLGGKCICID 120
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre6g00576 120 Pfam Late nodulin protein 61 103 IPR009810 GO:0046872
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre6g00576 Trre-Chr6 4324314 4326150 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre6g00576 1 68 Sucrose Transporter Gene Family AT1G71890 50.000 3.35e-12 60.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre6g00576 - K15378 gmx:100782007 67.781