Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre6g00546 ATGGCGGATCAGGTTCAGCAACCTACAATCATGGAGAAGGTCACTGGCCAGCTCCACCGTCGATCTGGTCTTTCATCTGGTATCAGGGGTTATGATGCCACCTACCGCAATCCTGCAATGTTCCAAAAGTACTCGTATGGAAATTACTCAAATGCAGCATTGCAGAATCCAATGGCACCCACATGCAGAGCTACTGTTGATTTATCTGCAGTTGCAACAACTGCTTCACCTGTCTTTGTTGCTGCTCCCGCTGAAAAGAGCCACTTTCTTATCGACTTTCTCATGGGTGGTGTTTCTGCTGCAGTTTCCAAAACTGCTGCTGCTCCCATTGAACGTGTTAAGCTTTTGATCCAAAACCAGGACGAGATGATCAAAACTGGCAGGCTTTCTGAGCCCTACAAGGGTATTGGTGATTGTTTCAAAAGAACAATGGCTGATGAGGGTGTGGTTGCTCTTTGGAGAGGAAACACTGCTAATGTCATCCGTTATTTCCCCACTCAGGCTTTGAACTTTGCATTCAAAGATTACTTCAAGAGGCTTTTCAACTTCAAGAAGGACAGAGATGGTTACTGGAAATGGTTTGCTGGAAATTTGGCATCTGGAGGTGCTGCTGGTGCTTCATCCCTCTTGTTTGTTTACTCTCTTGATTATGCTCGTACTCGTCTTGCCAATGATGCTAAGGCAGCAAAGAAAGGCGGAGAAAGGCAATTCAATGGTCTTGTTGATGTCTACAAGAAGACTTTGGCATCTGATGGAGTTGCTGGGCTTTACCGTGGTTTCAACATCTCCTGTGTTGGAATCATTGTGTACCGTGGTCTCTATTTTGGAATGTACGATTCCCTCAAACCAGTTCTTCTTACTGGAAAGTTGCAGGATAGCTTTTTCGCCAGTTTTGGGCTTGGATGGCTCATCACCAATGGTGCTGGTCTAGCATCATACCCAATTGACACTGTCAGGAGAAGAATGATGATGACATCTGGAGAAGCTGTCAAGTACAAGAGCTCCTTGGATGCATTCAAACAAATTCTCGCGAATGAGGGTGCCAAGTCATTGTTTAAGGGTGCTGGTGCTAACATCCTTCGTGCTGTTGCTGGTGCCGGTGTGCTCGCTGGTTATGACAAGTTGCAGGTTATTGTGTTCGGCAAGAAATATGGATCTGGTGGTGCTTAA 1170 0.4581 MADQVQQPTIMEKVTGQLHRRSGLSSGIRGYDATYRNPAMFQKYSYGNYSNAALQNPMAPTCRATVDLSAVATTASPVFVAAPAEKSHFLIDFLMGGVSAAVSKTAAAPIERVKLLIQNQDEMIKTGRLSEPYKGIGDCFKRTMADEGVVALWRGNTANVIRYFPTQALNFAFKDYFKRLFNFKKDRDGYWKWFAGNLASGGAAGASSLLFVYSLDYARTRLANDAKAAKKGGERQFNGLVDVYKKTLASDGVAGLYRGFNISCVGIIVYRGLYFGMYDSLKPVLLTGKLQDSFFASFGLGWLITNGAGLASYPIDTVRRRMMMTSGEAVKYKSSLDAFKQILANEGAKSLFKGAGANILRAVAGAGVLAGYDKLQVIVFGKKYGSGGA 389
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre6g00546 389 ProSiteProfiles Solute carrier (Solcar) repeat profile. 87 180 IPR018108 -
Trre6g00546 389 PANTHER ADP,ATP CARRIER PROTEIN 1-RELATED-RELATED 81 388 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Trre6g00546 389 Gene3D Mitochondrial carrier domain 90 385 IPR023395 -
Trre6g00546 389 SUPERFAMILY Mitochondrial carrier 87 374 IPR023395 -
Trre6g00546 389 ProSiteProfiles Solute carrier (Solcar) repeat profile. 292 378 IPR018108 -
Trre6g00546 389 FunFam ADP,ATP carrier protein, mitochondrial 90 385 - -
Trre6g00546 389 PRINTS Mitochondrial carrier protein signature 257 275 IPR002067 GO:0055085
Trre6g00546 389 PRINTS Mitochondrial carrier protein signature 301 323 IPR002067 GO:0055085
Trre6g00546 389 PRINTS Mitochondrial carrier protein signature 92 105 IPR002067 GO:0055085
Trre6g00546 389 PRINTS Mitochondrial carrier protein signature 105 119 IPR002067 GO:0055085
Trre6g00546 389 PRINTS Mitochondrial carrier protein signature 207 225 IPR002067 GO:0055085
Trre6g00546 389 PRINTS Mitochondrial carrier protein signature 155 175 IPR002067 GO:0055085
Trre6g00546 389 Pfam Mitochondrial carrier protein 87 184 IPR018108 -
Trre6g00546 389 Pfam Mitochondrial carrier protein 293 378 IPR018108 -
Trre6g00546 389 Pfam Mitochondrial carrier protein 191 287 IPR018108 -
Trre6g00546 389 PRINTS Adenine nucleotide translocator signature 192 205 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Trre6g00546 389 PRINTS Adenine nucleotide translocator signature 166 178 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Trre6g00546 389 PRINTS Adenine nucleotide translocator signature 133 154 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Trre6g00546 389 PRINTS Adenine nucleotide translocator signature 89 101 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Trre6g00546 389 PRINTS Adenine nucleotide translocator signature 297 313 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Trre6g00546 389 ProSiteProfiles Solute carrier (Solcar) repeat profile. 192 284 IPR018108 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre6g00546 Trre-Chr6 4069497 4070894 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre6g00546 1 389 Antiporters AT5G13490 80.916 0.0 608
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre6g00546 K05863 - gmx:100789942 695.656