Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre6g00528 ATGGTTACCACCATAACAAGCACTTACACTGTGATTCCAGAAGAATCAACACCAGAAGGTCGTTTATGGCTCTCTGACAAAGACCAAGTAGCAACTCAACACCACACACCCACCATTTACATTTACAAACCAAAACAAAACCAAGAAAACGTCATAGAAACACTAAAGAACTCTCTAAGCAAAGTTCTAGTTCACTACTATCCTATAGCTGGTAGATTGTGTTACGCTGAAGAAGGTGGTAGAGTAGAATTGAATCTCAATGCAAAAGGAGCCATTTTGATTGAAGCTAAAACCACAAAAACAATTCATGATTATGGTGACTTTTCACCTTCTGATTCAACCAAAGAGCTTGTTCCAATAATCAATTACAATCAACCATTTCAAGAAATTCCACTTCTTCTTGTGCAACTCACAAGTTTCAAAAATAACCAAGGCTTTGCACTTGGTGTTGCTTTTTCCCATTCTTTATCAGATGGCCTTGGAGCTGTTCAATTCATCAACTCATGGGCGAAAATAGCACGTGGCGAAACCCTAAAGCCTAATGAATTACCCTTTCTTGACAGAACACTAATCAAATTTTCACACACACCGTCGAAAGTACCATGTGTTTGA 612 0.384 MVTTITSTYTVIPEESTPEGRLWLSDKDQVATQHHTPTIYIYKPKQNQENVIETLKNSLSKVLVHYYPIAGRLCYAEEGGRVELNLNAKGAILIEAKTTKTIHDYGDFSPSDSTKELVPIINYNQPFQEIPLLLVQLTSFKNNQGFALGVAFSHSLSDGLGAVQFINSWAKIARGETLKPNELPFLDRTLIKFSHTPSKVPCV 203
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre6g00528 203 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 11 194 - -
Trre6g00528 203 Pfam Transferase family 4 200 - -
Trre6g00528 203 Gene3D - 3 201 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre6g00528 Trre-Chr6 3842257 3842868 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre6g00528 1 197 Monolignol Biosynthesis Gene Families AT5G48930 37.186 1.50e-40 141
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre6g00528 K13065 - gmx:100779814 253.447