Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre6g00527 ATGAAGAAAAAAGAAGGTTCAAGGCCTTTTAGTAAATTTGAAGCAATTGGTGCACATATATGGAGATGTGCATCTAAGGCACGTGATCTTGAAAATAATCAAGAAAGTGTTCTTAGATTCCATGCTGATATTAGAAAAAGAATTAATCCACCACTTCCTCAAACCTTTTTTGCTAATGCATTAGCACTAACAGCAACAAAGGCATATATTGGAGAAATCACATCAAAGCCTTTAGGGTATGCAGCAGAAAAGATAAGGGAAGCAGCTGAGCTTGTTAAAGATGATTTTATAAAGTCACAAATTGATTTTATTAGAAGTTTCAAAAATATGGATGATGCTAAGGACTTGTTTCTTGGTGATGAAACTGAAAAAGCACCATATTTTGGGAATCCAAATATTCAAATTGCTTGTTGGATGACAATCCCATTTTATGAAGCTGATTTTGGATGGGGAAAGCCTATTTACTTTGGATATGCTGGTGTGTCTCCACATGATAGAGCATACATTCATCTTAGTCCTGATGGAGATGGCTCTGTTATTGTGTCTTTGCATTTTCAGGTTGCACATTTGGAGCTTTTCAAGAAGTTCTTCTATAAGGATATATGA 606 0.3515 MKKKEGSRPFSKFEAIGAHIWRCASKARDLENNQESVLRFHADIRKRINPPLPQTFFANALALTATKAYIGEITSKPLGYAAEKIREAAELVKDDFIKSQIDFIRSFKNMDDAKDLFLGDETEKAPYFGNPNIQIACWMTIPFYEADFGWGKPIYFGYAGVSPHDRAYIHLSPDGDGSVIVSLHFQVAHLELFKKFFYKDI 201
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre6g00527 201 Gene3D - 1 199 IPR023213 -
Trre6g00527 201 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 7 196 - -
Trre6g00527 201 Pfam Transferase family 4 198 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre6g00527 Trre-Chr6 3841506 3842111 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre6g00527 2 199 Monolignol Biosynthesis Gene Families AT5G48930 33.838 5.89e-39 136
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre6g00527 K13065 - gmx:100779814 248.054