Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre6g00498 ATGGTGAAACTTGGCTTGCCAAAGGCAGCCTTTTTGTGTGGTGACAAGTTGGGTAATCTCATTTGGGGAGTAGCACAAAACTTTTTTCTATTTATTGCAATGGTGATTATGAGCAATGGTTTACATTTTTTCCTAAAGCCTTATTCTCAACCTCGAATCACTTCTGACATATTTGTAGGACTAATTTTTGGAAACATAGGATTTGCACGCGATCTATTTACTGAATTCAACAAGACATTTGGATTTATAATTGATTTTGGTATGATGGGTTACATGTTTGCATTAGGAGTAGAAATGGACCCATATGTACTATTACAAAAACCACCAAGACATGTTAGAGTTGCTTATTCTGGAGTTGGCATAACATTCATGCTAGCAATTGTTGTAACCCCTCTTATAAGGTACTTCCCACATATAAATAAACTATTAGAATACACTACAGCTCTCTCCATCCTTCTATCTAGCACGGATTCGCCTGCATTGACGCGATTATTAACACAGCTCAAAATCGGAAAGTCGGATATTGGGAAGCTTGTAATCGCATCCGCAATGCACTCAGATTTTGTGTGCTATTGTTTTCTTTCCATTTGTTACATACTTGCTCCACTCCCCGAAATTTGCGATGATTTGCAAAAAAGTTATATTTCAAAAACGAGCAAAATGGGTTTGGCAGTTTTGGTAGAAGTTTTATTCACACTAATGGTTTCGCCGTTTTTTATGAGTTGGGTTGATGAAGAAAATCCAGATGGTAAACCTATGAAAGGTCCACATTTGATACTTTCAATTGCATTCGTGGTGTTAATGTGTGCCTCTTCTGCTTTCGTTGGTTTTACTCCAATCTTAAGTGCATTTTTGGTAGGTGTTTGTTTTCCTAGAGAAGCCGATTTTAGGCACTTCGAAGCTAAAAAGTATCGTACATGGGCAAATATAGTGTTTCTTATGGTTATTTCAATAACTGGAAAAATTTCTGGAGCACTTGTTTCTGGTGCAGTACAAGGATTTCGTTGGCCTGAAGCAACTGCAATAGGATTGCTTCTTACAACAAAAGGACATTTGCATATCTACTTGGCTGTCAAAGTGATGAATTGTGTAGCAACAACTAAGTCCAATGGCATTGGGATGATAATTGCAATATTTTTTACAGTTATGTACACACCATCAGTTGTAGCACAAATCATAAAACATGCAAAGAAACGCGTACCTACTCGTCACATAGTGCTTCAATCGCTCGACCCATTGAGCGAACTAAGGATCCTCTTATGTGTTCATGGACCTCACAATGCTCCTGCTTCCGTAAACTTTGTGGAGATTTCAAAAGGAGCAGCTGATCCTGGTATTCTAGTATATGTCACTGACATGATTGAACTAACCAATGAAATATCGGCAACTTTAGAGACGGACGAAGGAATGCACACAGCAACTGTGAAAGACAGGGAAATAATGGAAATGAGAGAAAAAATAACAAACTCATTCCAGGCACATGTTTTAGATAGTGGTGAAGGTATTACATTGAAAAGAACCCTCGCACTGTCAACAATTAATAACATGCCACGAGACATTTGTATTTTAGCAGAGGACATGATGGTTGCCCTTGTCATATTACCATTCCATAGGGTTCAGCGTCAGGACGGAACATTGGATGGTGGTAATCAAGGGTTCAGATATGTCAACAGAAAGGTCCTGAGAAGTGCCCCTTGTTCTGTCGGAATTCTAGTAGATAGAGGCCTTGGATCATTTGAACGTTTATCAAGATCTCAAACAAAAATAAATTTGGCAGTCATATTCATTGGTGGGAAAGATGATAGAGAAGCACTTGCCTACGCTAGCCGTGTCGCACGACATCCAGGAGTAAAGCTCACTGTAATAAGATTCCTAGTAGATACAAGTGCAGAATCCTCTAGATTAGCTGGATACAGAATCATCCTACCAGATCAAGAGAAAGAAATGCAGTTAGATGATGAATGTTTTGCAGAGTTCTATGAGAAGCATGTGATTGGCGGAAAAATTGCATACATGGAGAAGCATCTTGCAAATGCTGCCGAGACATTCTCTATTCTCAAATCATTTGAAGGGCAATATTCATTGGTTATTTTAGGAAGAGAAGGAGGGGTAAATTCTATTTTAACAAGGGGGATGAATGATTGGCAGCAGTGTCCTGAACTTGGACCAATAGGGGATGTTCTTTCAGGACCAGACTTCTCAAGGACTGTCTCAGTTTTGATCATACAACAACACAGAATTAAAGGAGAAATAGATGGACTAGCTGAAGACTTTTCTATCATGTCATATAATAATAAGTATGGTTAA 2307 0.3866 MVKLGLPKAAFLCGDKLGNLIWGVAQNFFLFIAMVIMSNGLHFFLKPYSQPRITSDIFVGLIFGNIGFARDLFTEFNKTFGFIIDFGMMGYMFALGVEMDPYVLLQKPPRHVRVAYSGVGITFMLAIVVTPLIRYFPHINKLLEYTTALSILLSSTDSPALTRLLTQLKIGKSDIGKLVIASAMHSDFVCYCFLSICYILAPLPEICDDLQKSYISKTSKMGLAVLVEVLFTLMVSPFFMSWVDEENPDGKPMKGPHLILSIAFVVLMCASSAFVGFTPILSAFLVGVCFPREADFRHFEAKKYRTWANIVFLMVISITGKISGALVSGAVQGFRWPEATAIGLLLTTKGHLHIYLAVKVMNCVATTKSNGIGMIIAIFFTVMYTPSVVAQIIKHAKKRVPTRHIVLQSLDPLSELRILLCVHGPHNAPASVNFVEISKGAADPGILVYVTDMIELTNEISATLETDEGMHTATVKDREIMEMREKITNSFQAHVLDSGEGITLKRTLALSTINNMPRDICILAEDMMVALVILPFHRVQRQDGTLDGGNQGFRYVNRKVLRSAPCSVGILVDRGLGSFERLSRSQTKINLAVIFIGGKDDREALAYASRVARHPGVKLTVIRFLVDTSAESSRLAGYRIILPDQEKEMQLDDECFAEFYEKHVIGGKIAYMEKHLANAAETFSILKSFEGQYSLVILGREGGVNSILTRGMNDWQQCPELGPIGDVLSGPDFSRTVSVLIIQQHRIKGEIDGLAEDFSIMSYNNKYG 768
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre6g00498 768 PANTHER CATION/H + ANTIPORTER 32 746 - -
Trre6g00498 768 Gene3D - 25 305 IPR038770 -
Trre6g00498 768 Gene3D - 416 714 - -
Trre6g00498 768 Pfam Sodium/hydrogen exchanger family 32 298 IPR006153 GO:0006812|GO:0015297|GO:0016020|GO:0055085|GO:1902600
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre6g00498 Trre-Chr6 3622382 3625471 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre6g00498 12 761 Antiporter Super Family AT3G52080 44.348 0.0 667
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre6g00498 K26731 - gmx:100786469 1012.29