Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre6g00494 ATGGGTAAAATCAATACCAAGGTTGAAACCGATAAGCTAACACTTGGGAACATTGGGAAGCTATTCTTGGGCAAGGAGTCGGGTCCTTTTATAAATTCTTTGGATAAGCTCTATCAAGGTTTGCTTCCAGGAGTGAGAGCCTATCCAATTAATATTCCTGGTTTTGCATACCACCATGCTCTTAAGTGTAGAAGAAAGCTTGAGGACATTTTTTGGATGGAGTTAGATAAGAGAAAGAATGAAAATAATGTGGAAACATTAATAGATCTAATGGATGGGTTGATACAAATTGAAGATAGTGAAGGTGGCAAATTAAGTGACAAAGAAGTTATAGACAACATTGTCTCTCTAGTGTTTGGTGGATATATCTCTACATCCGTTGTATCAATGTGGGCTATTTACCTTCTTGCTAAGCATCCAAATGTGCTACAAAAGCTAAGGGAAGAGAACATGGCTTTCAAAAAGGGAAGTCCAGAGGAATTTCTTACAACTAAAGATGTTTCAAATTTAAAATACACAAACAAGGTCGTTGAAGAAGTGATAAGAATGACGAATGTTACACCTTTAATTTTTAGAAAAGCTGTAAATGAAGTCGACTATAAAGGTTATAAGATACCAAAGGGATGGAATGTAATTCTCCTCATTCGCTATATTCATACAAATCCAGAGAACTATAAAGATCCTTTGTATTTCAATCCTGATAGATGGAATGAGCCAGCAAAGCCCGGAACATACCAAGTGTTTGGTGGTGGACAAAGACAATGCCCTGGAAACATGCTTGCAAGAACTCAACTTGCACTTATGCTTCATCATTTGTCAATAGGATACAAGTAA 834 0.3669 MGKINTKVETDKLTLGNIGKLFLGKESGPFINSLDKLYQGLLPGVRAYPINIPGFAYHHALKCRRKLEDIFWMELDKRKNENNVETLIDLMDGLIQIEDSEGGKLSDKEVIDNIVSLVFGGYISTSVVSMWAIYLLAKHPNVLQKLREENMAFKKGSPEEFLTTKDVSNLKYTNKVVEEVIRMTNVTPLIFRKAVNEVDYKGYKIPKGWNVILLIRYIHTNPENYKDPLYFNPDRWNEPAKPGTYQVFGGGQRQCPGNMLARTQLALMLHHLSIGYK 277
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre6g00494 277 PANTHER CYTOCHROME P450 26 4 276 - -
Trre6g00494 277 Gene3D Cytochrome P450 1 276 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre6g00494 277 Pfam Cytochrome P450 56 272 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre6g00494 277 PRINTS E-class P450 group I signature 109 126 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre6g00494 277 PRINTS E-class P450 group I signature 245 255 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre6g00494 277 PRINTS E-class P450 group I signature 129 155 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre6g00494 277 PRINTS E-class P450 group I signature 255 277 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre6g00494 277 PRINTS E-class P450 group I signature 214 238 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre6g00494 277 PRINTS E-class P450 group I signature 174 192 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre6g00494 277 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 248 257 IPR017972 GO:0005506|GO:0016705
Trre6g00494 277 SUPERFAMILY Cytochrome P450 9 274 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre6g00494 277 PRINTS P450 superfamily signature 255 266 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre6g00494 277 PRINTS P450 superfamily signature 120 137 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre6g00494 277 PRINTS P450 superfamily signature 175 186 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre6g00494 277 PRINTS P450 superfamily signature 246 255 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre6g00494 Trre-Chr6 3596738 3600587 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre6g00494 1 277 Cytochrome P450 AT2G32440 39.007 4.91e-62 201
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre6g00494 - - tpra:123916160 526.554