Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre6g00493 ATGGGTAAAATCAATACCAAGGTTGAAACCGATAAGCTAACACTTGGGAACATTGGGAAGCTATTCTTGGGCAAGGAGTCGGGTCCTTTTATAAATTCTTTGGATAAGCTCTATCAAGGTTTGCTTCCAGGAGTGAGAGCCTATCCAATTAATATTCCTGGTTTTGCATACCACCATGCTCTTAAGTGTAGAAGAAAGCTTGAGGACATTTTTTGGATGGAGTTAGATAAGAGAAAGAATGAAAATAATGTGGAAACATTAATAGATCTAATGGATGGGTTGATACAAATTGAAGATAGTGAAGGTGGCAAATTAAGTGACAAAGAAGTTATAGACAACATTGTCTCTCTAGTGTTTGGTGGATATATCTCTACATCCGTTGTATCAATGTGGGCTATTTACCTTCTTGCTAAGCATCCAAATGTGCTACAAAAGCTAAGGGAAGAGAACATGGCTTTCAAAAAGGGAAGTCCAGAGGAATTTCTTACAACTAAAGATGTTTCAAATTTAAAATACACAAACAAGGTCGTTGAAGAAGTGATAAGAATGACGAATGTTACACCTTTAATTTTTAGAAAAGCTGTAAATGAAGTCGACTATAAAGGTTATAAGATACCAAAGGGATGGAATGTAATTCTCCTCATTCGCTATATTCATACAAATCCAGAGAACTATAAAGATCCTTTGTATTTCAATCCTGATAGATGGAATGAGCCAGCAAAGCCCGGAACATACCAAGTGTTTGGTGGTGGACAAAGACAATGCCCTGGAAACATGCTTGCAAGAACTCAACTTGCACTTATGCTTCATCATTTGTCAATAGGATACAAGTGGGAGCTCATTAATCCGAACGCAAATATAATTTATCTTTCACATCCTGCTCCTATTGACGGGGCCGAGGTCAAGTTTAGCAAATTGTGA 921 0.3735 MGKINTKVETDKLTLGNIGKLFLGKESGPFINSLDKLYQGLLPGVRAYPINIPGFAYHHALKCRRKLEDIFWMELDKRKNENNVETLIDLMDGLIQIEDSEGGKLSDKEVIDNIVSLVFGGYISTSVVSMWAIYLLAKHPNVLQKLREENMAFKKGSPEEFLTTKDVSNLKYTNKVVEEVIRMTNVTPLIFRKAVNEVDYKGYKIPKGWNVILLIRYIHTNPENYKDPLYFNPDRWNEPAKPGTYQVFGGGQRQCPGNMLARTQLALMLHHLSIGYKWELINPNANIIYLSHPAPIDGAEVKFSKL 306
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre6g00493 306 SUPERFAMILY Cytochrome P450 9 303 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre6g00493 306 Gene3D Cytochrome P450 1 306 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre6g00493 306 PRINTS E-class P450 group I signature 109 126 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre6g00493 306 PRINTS E-class P450 group I signature 255 278 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre6g00493 306 PRINTS E-class P450 group I signature 245 255 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre6g00493 306 PRINTS E-class P450 group I signature 129 155 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre6g00493 306 PRINTS E-class P450 group I signature 174 192 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre6g00493 306 PRINTS E-class P450 group I signature 214 238 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre6g00493 306 PANTHER CYTOCHROME P450 26 4 291 - -
Trre6g00493 306 PRINTS P450 superfamily signature 255 266 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre6g00493 306 PRINTS P450 superfamily signature 175 186 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre6g00493 306 PRINTS P450 superfamily signature 246 255 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre6g00493 306 PRINTS P450 superfamily signature 120 137 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre6g00493 306 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 248 257 IPR017972 GO:0005506|GO:0016705
Trre6g00493 306 Pfam Cytochrome P450 56 281 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre6g00493 Trre-Chr6 3596307 3600587 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre6g00493 1 305 Cytochrome P450 AT2G32440 37.742 4.65e-67 215
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre6g00493 - - tpra:123916160 583.563