Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre6g00489 ATGGGTAAAATCAATACCAAGGTTGAAACCGATAAGCTAACACTTGGGAACATTGGGAAGCTATTCTTGGGCAAGGAGTCGGGTCCTTTTATAAATTCTTTGGATAAGCTCTATCAAGGTGTGCTTCCAGGAGTGAGAGCCTATCCAATTAACATTCCTGGTTTTGCATACCACCATGCTCTTAAGTGTAGAAGAAAGCTTGAGGACATTTTTTGGATGGAGTTAGATAAGAGAAAGAATGAAAATAATGTGGAAACATTAATAGATCTAATGGATGGGTTGATACAAATTGAAGATAGTGAAGGTGGCAAATTAAGTGACAAAGAAGTTATAGACAATATTGTCTCTCTAGTGTTTGGTGGATATATCTCTACATCCGTTGTATCAATGTGGGCTATTTACCTTCTTGCCAAGCATCCAAATGTGCTACAAATGCTAAGGGAAGAGAACATGGCTTTCAAAAAGGAAAGTCCAGAGGAATTTCTTACAACTAAAGATGTTTCAAATTTAAGATACACAAACAAGGTCGTTGAAGAAGTGATAAGAATAACGAATGTTACACCTTTAATTTTTAGAAAAGCTGTAAATGAAGTCGACTATAAAGGTTATAAGATACCAAAGGGATGGAATGTAATTCTCCTCATTCGCTATATTCATACAAATCTAGAGAACTATAAAGATCCTTTGTATTTCAATCCTGATAGATGGAATGAGCCAGCAAAGCCCGGAACATACCAAGTGTTTGGTGGTGGACGTACAAAGACAATGCCCTGGAAACATGCTTGCAAGAACTCAACTTGCACTTATGCTTCATCATTTGTCAATAGGATACAAGTGGGAGCTCATTAA 849 0.3698 MGKINTKVETDKLTLGNIGKLFLGKESGPFINSLDKLYQGVLPGVRAYPINIPGFAYHHALKCRRKLEDIFWMELDKRKNENNVETLIDLMDGLIQIEDSEGGKLSDKEVIDNIVSLVFGGYISTSVVSMWAIYLLAKHPNVLQMLREENMAFKKESPEEFLTTKDVSNLRYTNKVVEEVIRITNVTPLIFRKAVNEVDYKGYKIPKGWNVILLIRYIHTNLENYKDPLYFNPDRWNEPAKPGTYQVFGGGRTKTMPWKHACKNSTCTYASSFVNRIQVGAH 282
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre6g00489 282 PRINTS E-class P450 group IV signature 111 137 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre6g00489 282 PRINTS E-class P450 group IV signature 219 237 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre6g00489 282 PRINTS E-class P450 group IV signature 203 217 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre6g00489 282 PRINTS E-class P450 group IV signature 170 186 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre6g00489 282 Gene3D Cytochrome P450 1 256 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre6g00489 282 SUPERFAMILY Cytochrome P450 9 252 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre6g00489 282 Pfam Cytochrome P450 56 253 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre6g00489 282 PANTHER CYTOCHROME P450 26 4 252 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre6g00489 Trre-Chr6 3582941 3584944 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre6g00489 1 251 Cytochrome P450 AT2G32440 37.891 5.52e-50 170
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre6g00489 - - tpra:123916160 472.241